KEGG   Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0688
Entry
YPDSF_0688        CDS       T00505                                 
Name
(GenBank) hypothetical protein
  KO
K08961  chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
Organism
ypp  Yersinia pestis Pestoides F (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypp00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    YPDSF_0688
Enzymes [BR:ypp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.20  chondroitin-sulfate-ABC endolyase
     YPDSF_0688
    4.2.2.21  chondroitin-sulfate-ABC exolyase
     YPDSF_0688
SSDB
Motif
Pfam: Lyase_catalyt Lyase_N Lyase_8 Lyase_8_C
Other DBs
NCBI-ProteinID: ABP39094
Position
complement(775357..778470)
AA seq 1037 aa
MYAPSRLKLIALTMTTLLGTAAYTPHLSANNTKSAKTEVSQKALMQSSIIDFDGNQLPDF
VTASSGSTLSLSSTRYIMGQQSLKWEWQAGSTMTIEHPITLVTDKVASKTWGRKATQVLS
FWIYNETPVDDYMIVDLGRGLGPSGAPDAGIKVKMNFSGWRTVGVSLQNDLEGREIEGIG
FDDNAEGESGGRSTIAGGAKSDMDSIRFRAPLKAPAGIFYIDRVMLSIDDARYQWSDDHV
KTRYQIPEINFRLPAKLPAPTAGEIAAADDIRGALIRVFTEGQGGENGLVVVDNREKLRA
HFAALKIQRDADGQLSGRHIITDKQKVLYQPEFMDDIDQQRFSDYVLLGDYTTLMFNISR
AYQRSTSEEVRQELADMYILMTQHLLDQGYMDGSGLVTTHHWGYSSRWWYISAMLMANEL
DKHQLRQPVSDALLWYSREFKANFDMVPGPESSDLDYFNTLSRQHLALLMLESDPAKRVA
LLKRFGEYINVALSQTPPGGYDGLRPDGTAWRHEGNYPGYSFPAFKNAGQLVYMLHGTPF
AVSDEGRAALKKAMLSAWVYSNPATSLGLAGRHPFNSSSVTLFQDAFRWLALTGDPKTGD
KVDKALAAAYLQITETPESESEAIFGVRIAPAELPQGNWTFNGGAFGIHRFSDKMVTLKA
YNSNVWSSEIYYRDNRYGRYQSHGAIQVLPYGNQKEIGFVQDGWDWNRNPGTTTIHLPLA
ELDSPNTHTLMLRGNHPFSGHSSLSGKYGMFAFKFDAPSMPKFDSSFTARKSALETENRL
VLLGSNISNNTEKYATETTLFQHGITDKASDLWVNGERITALPYQRALEEGDWLIDGHGN
GYLLTKGAKGEVRRQHQVSANDKSRDPTEGNFSLAWLDHGAKPQNAQYEYLMVLEATPEG
MQQLATDYRAGKKVYEVLRQDASAHIVRDNVTQTTGYAAFSSVTPDEGVVKNIAQPAIVM
TQMQSHGQLKISGVTPDLNMTRTTKATPLAIAVTLNGQWQATENNPQVSVKLAGETTQLV
FTSYFGMPQEVTLKPMN
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgtatgcaccatccaggttaaaacttattgctcttaccatgaccacattattaggtact
gcggcttacacacctcacctttcggccaataatacaaaaagtgcgaaaacagaggtaagt
caaaaagcgctgatgcaatcttcgattattgatttcgatggcaatcagctccctgatttt
gtcaccgccagttcaggttcaaccttatcgctgagctccacccgctatattatgggtcaa
cagtcgcttaaatgggaatggcaggcaggcagtaccatgaccattgagcatcctattaca
ctggtcaccgataaggtcgcctctaaaacctggggacgtaaagccacacaggtgctctct
ttttggatctataacgaaactccggtggatgattatatgatcgtcgatctggggcgaggg
ctcggcccgtcaggcgcaccggatgccggtattaaagtcaaaatgaatttcagtggctgg
cgcaccgtgggcgtgtcactgcaaaatgatctggaagggcgagaaatcgaaggcattggt
ttcgatgataatgcagaaggtgaaagcggtggacgtagcacgatcgccggtggtgcgaaa
agcgatatggacagcatccgttttcgggcaccgctaaaagcaccagcgggtatcttctat
attgatcgcgttatgttgtctattgatgatgctcgctatcaatggtcagatgatcacgtc
aaaacccgttatcagatcccggaaattaattttcgcttacccgccaaattacccgcacca
acggccggggaaatagcggcagctgatgacattcgtggtgcattgatccgcgtctttacc
gaaggtcaaggtggtgagaatggcttggttgtggtcgataatcgcgagaaattacgcgcg
cattttgcagcattaaaaattcaacgtgatgccgatgggcaattatcaggtcggcatatt
attacagataaacagaaggtgttatatcaaccagagtttatggatgatattgatcagcag
cgtttcagcgattatgtgctcttgggtgattacaccacattaatgttcaatatcagccga
gcctatcagcgcagcacatccgaagaggtgcgtcaggaactggctgacatgtatatcctg
atgactcaacacctgttggatcaaggttatatggatggtagtgggctggtgacaacccac
cactggggatacagctcacgctggtggtatatctcagccatgttaatggcaaacgaactg
gataagcatcaactacgtcagccagtttccgatgcgctgctgtggtattcccgtgaattt
aaagccaactttgatatggttccggggccggaaagctcggatttggactatttcaacacc
ctatcccgtcaacatctggcgttgctgatgctggaatctgatccggccaaacgcgtggca
ttgcttaagcgttttggtgagtacatcaatgtggcactttcacagaccccaccggggggc
tacgacggcttgcggccagatggtacggcatggcgtcatgaaggcaactatccaggttac
tcattccctgcctttaaaaatgccggccaattagtatacatgctacatggcacaccgttt
gcggtgagtgatgaagggcgagcggccctgaaaaaagccatgttatcggcatgggtctac
agtaacccagcaacctcgttggggctggcgggccgtcatccgtttaactcttcaagtgtg
actctgttccaagacgccttccgctggttggcactcacgggggatccgaaaaccggtgat
aaagtggataaagcgctggcggccgcttatctgcaaattaccgaaacaccagaaagtgag
agtgaagcaatctttggtgtgcgcattgctccagcagagctcccccaaggaaactggaca
tttaacggcggtgcattcgggatccaccgcttcagcgacaagatggtgacgctgaaggcg
tacaacagcaatgtctggtcatcagagatctattatcgtgataaccgttatggccgttat
cagagtcatggtgcaatacaagtactcccgtatggtaaccagaaagagataggttttgta
caagatggctgggactggaatcgcaatccgggcacaactacgatccaccttccattagct
gaactggatagcccgaatacgcataccctgatgttacgtggtaatcatccattcagtggt
cactcatcactaagtggcaaatatggcatgtttgcctttaaatttgatgcgccatctatg
ccgaagtttgacagcagttttaccgcgcgtaagagtgctctcgaaactgaaaatcggtta
gttctcttgggcagtaacatcagtaacaatacggaaaaatatgcgactgaaaccactctg
ttccaacatggcattacagataaagccagtgatctctgggtgaacggcgaacgtattacg
gcattgccttaccagcgcgcactggaggaaggtgattggttaattgatggccatggtaac
ggctatctcctgaccaaaggggcgaaaggtgaagtgcgccgccagcatcaggtttctgcc
aatgataaatcccgtgaccctactgaaggcaatttcagtctggcctggcttgatcacggg
gcgaaaccacagaatgcacaatacgaatatctgatggtgctagaggcaacaccggaaggc
atgcaacaactggccacagattatcgggccggtaagaaagtgtatgaagtgttacgtcaa
gatgcctccgcacatattgtgcgtgataacgtgacgcagacaaccggttacgctgccttt
agttctgtaacaccagatgagggtgtggtgaaaaatattgctcagccagccattgttatg
acgcaaatgcagagtcatggtcagcttaagatcagcggcgttacgccagatctgaatatg
acccgcacaacgaaagcgacgccattagcgattgccgtgacactcaacggccagtggcag
gccacggagaataatccgcaggtgagcgtaaaacttgcgggagagaccacgcaactggtg
tttaccagctactttggtatgccacaagaggtcacgctcaagccgatgaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system