KEGG T03307: DJ40

Yersinia pseudotuberculosis ATCC 6904: DJ40_597

Entry

DJ40_597          CDS       T03307

Symbol

rlmA

Name

(GenBank) ribosomal RNA large subunit methyltransferase A

K00563

23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]

Organism

ypq Yersinia pseudotuberculosis ATCC 6904

Brite

KEGG Orthology (KO) [BR:ypq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ypq03009]
    DJ40_597 (rlmA)
Enzymes [BR:ypq01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.187  23S rRNA (guanine745-N1)-methyltransferase
     DJ40_597 (rlmA)
Ribosome biogenesis [BR:ypq03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DJ40_597 (rlmA)

SSDB

Motif

Pfam:

RlmA_N Methyltransf_25 Methyltransf_31 Methyltransf_11 Methyltransf_12 Ubie_methyltran Methyltransf_32 Methyltransf_23 MTS FtsJ PCMT RrnaAD Methyltransf_29 mRNA_G-N7_MeTrfase Methyltransf_9 PrmA

Other DBs

NCBI-ProteinID:

AIN12725

Position

complement(636447..637286)

AA seq 279 aa
MSYQCPLCHQALQLSQQQWCCSNNHQFDCAKEGYVNLMPVQHKGSKQPGDSPEMMQARRA
FLDAGYYQPLQQRVSEILDEALPLDATRLLDIGCGEGYYTAAVADRLNKLRQMAIFGLDV
AKVAVRYGAKRYHQVNFCVASSHRLPFANGALDAVLRIYAPCKAVELARTVKPGGIVVTV
APGPRHLYQLKALIYAQVQLHDDTEEHLDGFELIRRETLAYDMKLTGEQGFNLLQMTPFA
WRASVDTGQKLAAQPSFSCETDFVISLHRRKTDSPQNDI

NT seq 840 nt +upstreamnt +downstreamnt
atgtcttatcagtgtcctctctgtcatcaagcactgcagcttagccaacagcagtggtgt
tgtagcaataatcatcagtttgattgcgccaaagagggctatgtcaatttaatgccagta
cagcataaaggctccaaacaacccggcgatagcccagagatgatgcaagcacgccgggct
tttcttgacgctggctattatcagcctttgcaacaacgggtaagcgagattctggatgag
gctttgccgcttgatgcaaccaggttattggacatcggttgcggtgaaggttattacacg
gcggcggtggctgatcggctaaataagttgcgccaaatggctatttttggtctggatgtg
gcaaaagtcgcggtaagatatggggctaaacgctaccatcaggtcaatttctgtgtggct
tccagccatcgtttaccttttgccaatggtgcactggatgccgtattacgcatttatgcg
ccttgtaaggcggtggaactggcccgcacggtaaagcctggcgggatcgtggttaccgtg
gcacccggccctcgccatctctatcagttaaaagcacttatttatgctcaggtgcaactg
catgatgatacagaagaacatcttgatggttttgagttaatccgccgcgaaacattggcc
tatgacatgaaactcacgggtgagcagggttttaatttattacagatgaccccgtttgcc
tggcgagcatcggttgatactgggcagaaattggccgctcaaccgtcttttagttgcgag
actgatttcgtcatttcactgcatcgtcgtaaaacagacagtcctcagaacgatatttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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