KEGG   Yersinia pseudotuberculosis ATCC 6904: DJ40_893
Entry
DJ40_893          CDS       T03307                                 
Symbol
caf1A
Name
(GenBank) F1 capsule-anchoring protein
  KO
K07347  outer membrane usher protein
Organism
ypq  Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ypq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DJ40_893 (caf1A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ypq02000]
    DJ40_893 (caf1A)
   02044 Secretion system [BR:ypq02044]
    DJ40_893 (caf1A)
   02035 Bacterial motility proteins [BR:ypq02035]
    DJ40_893 (caf1A)
Transporters [BR:ypq02000]
 Other transporters
  Pores ion channels [TC:1]
   DJ40_893 (caf1A)
Secretion system [BR:ypq02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   DJ40_893 (caf1A)
Bacterial motility proteins [BR:ypq02035]
 Pilus system
  Fimbrial proteins
   DJ40_893 (caf1A)
SSDB
Motif
Pfam: Usher PapC_N PapC_C
Other DBs
NCBI-ProteinID: AIN12540
Position
complement(986272..988725)
AA seq 817 aa
MGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPS
GEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLV
LSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFRQNGGYRRSQYIQLYPGLNLG
AWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVML
GDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSD
LHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYG
LPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQAWEVRY
NKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGDNRDKIDENSRSRDLRNQISA
VIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRI
LSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGH
NSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIHRHGLTFGPQINGTSVLVEVP
GVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETADLPPDAEVAKTDTKVLPTEGA
IVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQ
LLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH
NT seq 2454 nt   +upstreamnt  +downstreamnt
gtgggtgcccagcgttattcttttgatcccaatctgctagtggatggcaataacaacact
gatacctcgttatttgaacagggcaatgaattaccgggcacctatttggtggatattatc
ttgaatgggaataaagtggactctacgaatgtgacatttcattcggagaaatcgccatca
ggagagcctttcttgcaatcttgcttaaccaaggagcagctatcccgctatggtgtggat
gttgatgcctatcccgagttatctccagcattaaaaaactcacagacaaacccgtgtgtc
aatttagccgctatccctcaggccagtgaagagttccaattttataatatgcagttggta
ctgagtattccacaagcggctttacggcctgaaggtgaagtgccaatagaacgctgggat
gatggtattacggcttttttgctgaactacatggcaaatatcagtgaaacccagtttcgt
caaaatggtggataccggcgttcacaatatatccagttatatcccggtttaaatttgggg
gcgtggcgtgttcgtaatgcgaccaactggagtcaatctggcgatagggggggtaaatgg
caaagtgcttatacctatgccactcgtgggatttatcgtttaaagagtcgggtgacctta
ggggagagttacaccccaggtgattttttcgacagcattccctttcgtggcgtgatgttg
ggggacgatcctaatatgcagccaagtaaccagcgggattttataccggtggtgcgtggt
attgcccgtagtcaggcgcaggtggaaatcagacaaaatggttatctgatttatagtacg
gtggtgccgccggggccgtttgaactctctgacgtgatcccgagtaaatcaggcagtgac
ctacatgttagggtgctggaaagtaacggggcatcgcaggcgtttattgtgccttatgag
gtgccagccattgcattgcgcaaagggcatttgcgatacaatctggtggcagggcagtat
cgccccgccaatgctgatgttgagacgcctccggtcgctcaggcaaccgtcgcctacggc
ttgccgtggaacttgaccgcatttatcggtgagcagtggtcgcggcattatcaggcaacc
tctgccggattaggggggctattgggggagtatggcgcattgtcatccagtatcacgcag
gcaaccagtcagtatcaccatcaacaaccggttaaagggcaagcctgggaggttcgatac
aacaaaaccttacaagcctctgatacgtcattttcattggtgaatagtcaatacagcact
aatggtttcagtacgttatctgatgtattacaaagttaccggcagagcgggagtggcgat
aatagagataaaattgacgaaaattctcggtcaagggatttgcgtaaccaaatcagtgcg
gttatcgggcagtcattgggcaagtttggctacctgaatcttaattggtcgcggcaggtc
taccgtgggccgattccggctaagaattcgttgggaatacactataacctcaatgtcggt
aatagtttttgggcactgagttgggtgcaaaatgcgaatgagaacaagaatgatcggata
ttgagtttgtctgtcagtattccgctgggaggtcatcacgatacttatgcttcctataga
atgacatcttccaacgggagcaatgatcatgagataggaatgtacggccaggcttttgac
tctcgcttgagttggagtgtgcgtcaggcagagcattatggtcaacccaactcagggcat
aacagcggctcactcaggttgggctggcagggttcctatggcaatatcgcgggaaattac
tactatactccgagcatacgtcagttatccgctgatgtttccggaggggcgatcatccat
cggcatgggctgacattcgggccgcaaatcaatggcacctccgtgctggttgaagttccg
ggcgtcggcggggtgaccaccacagaagatcgccgtctgaaaacagattttcgcggttac
agcattgtgtctggcctctctccttatcaggagcacgatatcgtgttggaaactgcagat
ttaccgccggatgcggaggtggcaaaaacagataccaaggtcttgccgaccgagggggcg
attgttcgtgccagttttagcccgcaaatcggggcaaaggcgctgatgacgatcacccgc
gctaatggccaaaccattccgtttggtgcgatggcgagcttggttaatcagtcggccaat
gcagccattgtcgatgaaggggggaaagcctatctaaccgggttaccggaaacagggcag
ttattggtgcaatggggtaaagatgcgggccaacaatgccgggtggattaccagctctcg
ccagcggaaaaaggtgataccgggctgtatatgctcagcggagtatgccattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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