KEGG   Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB3879
Entry
YPTB3879          CDS       T00195                                 
Name
(GenBank) possible type I restriction enzyme (restriction subunit)
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
yps  Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:yps00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yps02048]
    YPTB3879
Enzymes [BR:yps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     YPTB3879
Prokaryotic defense system [BR:yps02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   YPTB3879
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII
Other DBs
NCBI-ProteinID: CAH23117
UniProt: Q663Z5
Position
complement(4626797..4630075)
AA seq 1092 aa
MSMQIAPKFQEEYSAKLPALALLSNLGWTYISPQQALSARAGKVDQVVLNQILREQLAKR
TFIFAGKEHAISDKAIDSLIAEVNSPALNQGLITANEHLYNHLLYGISVTEFIDGKRANP
TISLIDWNNPKNNSFVFTEEFSVTRANGIEARRPDIVCFVNGIPLVVIEAKRPDGNAKKG
PTIDEGISQSLRNQRHDEIPRLFAYSQILLSINGHDGRYGTCGTPAKFWATWREEDISDL
EMLTIKNRKLNAQQMDSIFRHRPVACLEWYQNLITGGELALTGQDQLLISLLLPERLLDM
ARFFTLFDKRAGKVIARYQQVFSIKRLLQRIETKNPDGSRNGGVIWHTTGSGKSLTMVFL
SKALILSETLKQCRIIVVTDRVDLENQLSRTFISTGELAGKRDKADAIATSGRRLAEQIG
RGTERILFSLIQKFNTATRLPECVNTSSDIIVLIDEGHRSHGGESHQRMKLALPNAAFVA
FTGTPLLKDDKTTNKFGPIVHAYTMQRAVEDKTVTPLLYEERPPELNVNERAIDSWFDRI
TEGLTDKQKADLKRKFANKGQVYNADDRIHLIALDIANHFVKNIDDGLKGQLACDSKAAA
IKYKKYLDEAGLFESAVVISSPDTREGNTEVDESGIPDVTKWWQDNVGSQDEQVYTRNVI
DRFDKDDSLKLLIVVDKLLTGFDEPKNAVLYIDKPLKGHNLIQAIARVNRLHPKKKFGLL
IDYRGILKELDTTIEDYQKLASRTQGGFDIDDLVGLYGQMSTEYKRLPQLYKNLWAIFAG
VKNKNDIEQLRQVLVPRTEEKYGEMVDVHLKVREDFYEALTQFASCLKVALQSATFFEDK
SFSEEDRQHYKETLRQFTSLRQLVKQDAGETVDYDQYTEQVKKLLDKHVVGVEVREPDGV
YEVSKMGQRPEEWSEDKTRNETDIIKTRVTRMIEQDLRDDPYAQEAFSKLLRLAIEEAEK
LFDHPLKQYILFREFEEQVQDRRLNEIPDVFAGNHHAQAYFGVYKKVLPEVFAVTDSQVI
DKWVKLAFEVDQAVDISVAENSINPQNIEADIRKKLLPMMFKECKAIGGGMDQAKKIVEM
IVQITRVGLSGV
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgagcatgcaaatcgcgccaaaattccaggaagagtacagcgccaagctcccggcgctg
gctctcttgagcaatttaggctggacctatatttcacctcagcaagccttgtctgcgcga
gcaggcaaggtagatcaggtggtcctaaaccagattttgcgtgaacagttagccaagagg
acgtttatctttgccggtaaagagcatgccatttctgacaaagcgattgatagcctgatt
gccgaagttaacagtccggcattaaaccagggattgattaccgccaatgagcacttgtac
aaccacctgttgtacggcatctcagtgacggagtttatcgatggcaaacgggcgaaccca
actatatcgctgatcgactggaacaacccgaagaacaacagctttgttttcaccgaagaa
ttcagcgtgacacgcgctaatggtattgaggcgcgcaggcccgatattgtctgctttgtg
aatggtattccgttggtagtcatcgaggctaagcgcccggatggcaatgctaaaaaaggg
ccaactattgacgaagggatatctcaaagtctgcgcaaccagcgccatgatgaaattccg
cgactgtttgcctacagccagatcttactgtcgataaacggccatgatggacgttacggg
acttgcggaacaccagccaagttttgggcgacatggcgggaagaagatatctccgatctg
gagatgcttaccataaaaaaccgcaaacttaacgcgcagcagatggattcaatcttcagg
caccgcccggttgcatgcctggaatggtatcagaacctgatcacagggggcgagctagct
ttaacgggccaggatcagctgcttataagcctgctgttacccgagcgcctgctggatatg
gctcgcttcttcacattgtttgataagagagccggtaaggtcattgcccgatatcagcag
gtattcagtatcaaacgactgctacagcgtatcgaaacgaagaatcctgatggtagccgc
aacggtggggttatctggcataccacgggttcaggtaagtcgctgacgatggttttcctc
agcaaggcgctgattctgagtgaaactctcaagcagtgtcgcatcatcgtggtaaccgat
cgcgtcgatttggaaaaccagcttagtcgcacctttatctcaaccggggaactggcaggt
aaaagggataaagccgatgccattgccacctctggcagacggttagccgaacagattggc
aggggtactgagcgtattctcttctcgttaattcagaaatttaacacggccacccgcctg
cccgagtgcgtgaataccagctctgatatcattgtgctgattgatgaaggccaccgtagc
catggcggtgagagtcatcaacgcatgaagctggctctgcccaacgcggcctttgttgct
tttaccggtacgccgttgctgaaagatgataagaccacgaataaatttggccccatcgtt
catgcttacaccatgcagcgtgcggtggaggacaagaccgttactccgcttctttacgag
gagcgcccgcccgagctgaacgttaatgaacgagcgatagatagctggtttgaccgtatc
actgaagggttaacagataaacaaaaggcggatttgaagcgtaagtttgctaataaaggg
caggtctataatgctgacgatcgcatccaccttattgcactggatatcgccaaccatttt
gtcaaaaacatcgatgatggtttgaaggggcaactcgcctgtgacagtaaagcagcagcg
ataaaatacaaaaagtatcttgatgaagccgggttgtttgagtctgcagtggtgattagt
tcgcctgacacgcgtgaagggaataccgaggtggatgaatctggtatccctgatgtgacc
aaatggtggcaagataatgtcggctctcaggatgagcaggtttatacgcgcaatgtcatc
gatcgttttgataaagatgattcgctgaagctactgattgtggttgataagttacttacc
ggttttgatgaacccaaaaatgccgtgctttacatcgataagccgcttaaagggcataac
ctgattcaggcaatcgcccgcgttaaccgcctccatcccaagaagaaatttggtctgtta
atcgattatcggggcatcctcaaagagctggataccaccattgaggattaccagaagctg
gcatcccgcacgcagggcggatttgatattgatgacttggtggggctgtacggccagatg
agtacggagtacaagcgccttccccagctgtataaaaatttgtgggcgattttcgctggt
gtaaaaaataaaaacgatattgagcagctgcgtcaggtattggtgccgcgcacggaagaa
aagtacggcgaaatggttgatgttcatcttaaagttcgcgaagacttctatgaagcactc
acgcaatttgccagctgcctgaaagtggcgttgcagtcggctaccttctttgaggataag
agtttcagtgaagaagaccgccagcactataaagagacgctgaggcaatttaccagcttg
cgccagttggtgaagcaggatgccggtgagacggtagattatgatcagtacactgaacag
gttaaaaagctgctggataaacacgttgttggcgtagaagtccgcgagcctgacggagtg
tatgaagtcagcaaaatgggacaacggcccgaagagtggagtgaggataaaacccgcaac
gaaacggatattatcaaaacccgcgtaacccgcatgattgagcaggatttacgtgatgat
ccttatgcccaggaagccttctcgaagttattgcgtctggctattgaagaggcggaaaaa
ctgtttgatcaccctctcaagcagtacatactatttcgtgagtttgaggaacaagtacag
gatcggcggctgaacgaaatacccgacgtctttgctggtaatcaccatgcgcaggcttac
ttcggagtgtacaaaaaagtgctgccggaggtttttgccgttaccgattctcaggtcatc
gataaatgggtgaagcttgcttttgaagtagaccaggctgttgatatctctgtggctgag
aactcgatcaatccgcaaaatatcgaggctgatatccgcaagaagcttctaccgatgatg
tttaaagagtgtaaggcaattggtggcgggatggatcaggcgaaaaaaattgtggaaatg
attgtccagattacccgtgtagggctgagcggagtgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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