KEGG T03718: BZ15

Yersinia pestis Shasta: BZ15_127

Entry

BZ15_127          CDS       T03718

Name

(GenBank) 2'-5' RNA ligase

K01975

RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]

Organism

ypv Yersinia pestis Shasta

Brite

KEGG Orthology (KO) [BR:ypv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ypv03016]
    BZ15_127
Enzymes [BR:ypv01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BZ15_127
Transfer RNA biogenesis [BR:ypv03016]
Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BZ15_127

SSDB

Motif

Pfam:

LigT_PEase 2_5_RNA_ligase2

Other DBs

NCBI-ProteinID:

AJJ50518

UniProt:

A0A3G5L9R3 A0A2U2GYW6

Position

complement(134591..135166)

AA seq 191 aa
MTNTVDELKRVRRLFFALTLPDAMQQEIVQWRAGHFSPEAGRPVAAANLHLTLAFLGEVS
ATKSQVLQQQAGRIQQAGFSVTLDDIGHWPGSGVIWLGCKNPPRGLLQLAQLLRSQAARS
GCYQTPLPFHPHVTLLRNATRPVALPAKSGNETFQADHFSLYESVFARGRTRYNIVQSWP
LAGSERKPDAC

NT seq 576 nt +upstreamnt +downstreamnt
atgacaaataccgttgacgaattaaaacgtgtccgccgcctattctttgccctgacactg
ccggatgccatgcaacaagagattgtgcaatggcgagctggtcatttctcgccagaggcg
ggtcgccctgtcgcggcggcgaatctgcacctgacactggcgttccttggtgaagtcagt
gcgacaaaatcccaggtgttacagcagcaagccgggcgtatccaacaagcaggtttcagc
gtgacattagatgatatcggccattggcccggttccggcgtgatttggctgggatgtaag
aacccccctcgtggcctgttgcaattggcgcagttgctgcgctcccaggcagcacgtagt
ggctgttatcaaacgccgctgccgtttcatccccatgttactctgttgcgtaacgcaacc
cgcccagtggcattacctgccaagagcggcaatgagaccttccaggcggaccatttctcg
ctgtatgaatcggtcttcgcgcggggccgcacccgctataacatcgtacaaagctggccg
ctggctggcagtgaaaggaaaccagatgcctgctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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