KEGG   Yersinia pestis D182038: YPD8_3415
Entry
YPD8_3415         CDS       T01833                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
Organism
ypx  Yersinia pestis D182038
Pathway
ypx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ypx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YPD8_3415 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ypx03019]
    YPD8_3415 (rhlB)
Messenger RNA biogenesis [BR:ypx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     YPD8_3415 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CCDC138_C
Other DBs
NCBI-ProteinID: ACY64083
Position
4316864..4318135
AA seq 423 aa
MTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLA
STFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYD
KQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR
MPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSNEEKMR
LLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKG
DLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYA
LNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAPRNNRK
RPG
NT seq 1272 nt   +upstreamnt  +downstreamnt
ttgactgaacagaagttttccgacttcgccctgcacccgctagttgttgaagcccttgaa
aacaaagggtttcagtattgcacgccgattcaggcgttagcattgccactcaccctctct
gggcgtgatgtagcaggtcaggcgcaaaccggtacaggcaagacgctggcattcttggcg
tctactttccattatttgctttctcacccagcagaagagggtcgccagactaatcaacca
cgcgcattaattatggcaccaacgcgcgaattagccgtgcaaattcactccgatgcagaa
tcactttcccaggtaaccgggctgaagttaggtctggcttatggtggggatggctacgat
aaacagcttaaagtgctggaaagtggcgttgatatcttgatcggtacaacaggccgttta
atcgattacgcgaaacaaaattatattaacctcggtgcgattcaagtcgtggtattggat
gaagcggatcgcatgtacgatctaggctttattaaagatatccgctggctgttccgccgt
atgccttccgttgataaacgtttaaatatgctgttttctgccactctctcgtatcgggta
cgtgaattggcattcgaacaaatgaataatgcagaatatgttgaagtggaaccgttacaa
aaaaccggtcaccgcatcaaagaagagctgttctatccttcaaatgaagaaaaaatgcgt
ctgttacagacgttaattgaagaagaatggcctgatcgctgtattatttttgctaatacc
aaacaccgttgtgaagagatctgggggcatttggctgctgatggtcaccgcgtcggttta
ttgacgggtgatgttgctcagaaaaaacgcctgcgtattctcgaagatttcaccaagggc
gatttggatattctggttgccaccgatgttgctgcccgtggtttacacattccattagtg
acccacgtcttcaactatgacctgccagatgactgtgaagattacgttcaccgcattggc
cgtactggccgtgctggcgagagtggtcactccatcagtctggcctgcgaagagtatgca
ttaaacttgccagcgattgagacctatacgggccatagcatcccggtaagcaaatataac
agtgacgcgctattaactgatctaccagcgcctaaacgcctagcccgtacccgcaccggg
aatggcccacgccgtaattctgccccacgccgcagtggagcaccacggaataaccgtaag
cgaccaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system