KEGG   Yersinia pseudotuberculosis YPIII (serotype O 3): YPK_2124
Entry
YPK_2124          CDS       T00665                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ypy  Yersinia pseudotuberculosis YPIII (serotype O:3)
Brite
KEGG Orthology (KO) [BR:ypy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ypy03016]
    YPK_2124
Enzymes [BR:ypy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     YPK_2124
Transfer RNA biogenesis [BR:ypy03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    YPK_2124
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: ACA68410
UniProt: A0A0H3B301
Position
complement(2353998..2355119)
AA seq 373 aa
MNYQLITTNNALQQVCEQARTHAHIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
TEWQPFRALLQDLNVVKYLHAGSEDLEVFLNAFDQMPTPMIDTQVLAAFSGRSLSCGFAM
LVAEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLAAKLVEATEAAGRMDAAK
DECLLLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLAEWRLRQARERDLAVNFVVR
EEHLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPIANLIDQ
PGYKKVFKDIKALIQSVSERSGLSSELLASRRQINQLLNWHWKLKLSDAQPELLTGWRGD
LLSSELLEILQHY
NT seq 1122 nt   +upstreamnt  +downstreamnt
ttgaattatcagttgatcacgaccaataacgcattgcaacaggtctgcgaacaagcccgg
acacatgctcacatcgcgttggatacagagtttgtcagaacgcgcacttactaccctcag
ttgggtttgattcaactgtatgatggtgaacaactctcacttatagatccattacctatc
acggaatggcagccttttcgcgcgttactgcaagatctgaatgtggtgaaatatttacac
gcaggcagtgaagatctcgaagtgtttttaaacgcttttgaccagatgccaaccccgatg
attgatactcaggtattagcggcattttctggccgtagcctatcctgcggctttgccatg
ctggtggctgagtttgaaggtgttgagttagataaaagtgaatcacgtacagactggatt
gcccggccgttgagtgaaaaacagtgcgattatgcggcggctgatgtgttttatctttta
cctctggcggctaaattagtcgaagccactgaggcggcagggcggatggacgcggcgaaa
gacgaatgtctattgctgtgccgccgtcggagtgagacgctcgatcctgaactggcttac
cgtgagattaccaatgcctggcaactccgtggccatcaactggcatgtttgcagaaatta
gccgaatggcgtttacgtcaggcacgggagcgggatttggcggttaactttgtggttagg
gaagagcacctgtggcaagttgcccgctatcaaccaacatcactcggtgagttagattct
cttggcttgagtgggcaggagatccgctatcacgggcgaacattgctggcactggtcgcc
gaagggaatgccgtccctgaagatcagcttcctcccccgattgctaacttgattgaccaa
ccggggtacaaaaaagtctttaaagatattaaagccttgattcaatcggtcagtgaacgt
agcggattaagcagtgaattactggcatcacgtcgccaaattaatcagttactcaattgg
cactggaagttgaagctttcagatgctcaacctgaattattaacaggctggcgtggcgat
ttattgtcttctgaattgcttgaaatcttacaacactattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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