KEGG   Yersinia pestis Z176003: YPZ3_0406
Entry
YPZ3_0406         CDS       T01210                                 
Name
(GenBank) transcriptional regulator, sorC family
  KO
K11531  lsr operon transcriptional repressor
Organism
ypz  Yersinia pestis Z176003
Pathway
ypz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ypz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YPZ3_0406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ypz03000]
    YPZ3_0406
Transcription factors [BR:ypz03000]
 Prokaryotic type
  Other transcription factors
   Others
    YPZ3_0406
SSDB
Motif
Pfam: Sugar-bind
Other DBs
NCBI-ProteinID: ADE63316
Position
485315..485995
AA seq 226 aa
MASLSISSRLGIGAAHLLMALIQPQQLLAVGFGETTMCALQHLSGFIASQQVRLVTLSGG
VGSYMTGIGQLDAACQVSIIPAPLRASNAHVADTFRQENSVRDVMLAACAADIAVVGIGS
VNQQKEATILRSGYISEGEQLMFSRKGAVGDILGYFIQADGALVPDMQIHQELIGISLAD
LTTIPTVIGVAGGVEKADVIVAALRGRYVNALVTDEVTARAIINLL
NT seq 681 nt   +upstreamnt  +downstreamnt
ttggcctccctcagtatcagtagccggttgggtattggtgccgcccatttattaatggcg
ctgatacagccacaacaacttttggccgttggtttcggtgagaccaccatgtgcgccttg
caacatttgagtggctttatcgcatcacagcaggtccgtttagtcacgttatccggcggt
gtcggctcctatatgacggggattggtcagttggatgcggcctgccaggtcagtatcatt
ccggccccgctgcgtgcctcaaatgcccatgttgccgacacgtttcgccaggaaaacagc
gtccgagatgtgatgctagccgcctgcgcggcagatattgcggtcgttgggatcggttcg
gttaatcagcaaaaagaagccacaattttgcgttcgggctatatcagcgaaggtgagcaa
ctgatgtttagccgtaaaggcgcggttggggatatcctcggttactttatccaagccgat
ggcgcgttggtgccagatatgcagattcatcaggagttgattggtatttcgttggctgat
ttaaccaccatcccaaccgtgattggtgtcgcagggggggtagaaaaagcggatgtgatt
gtcgcagcgctgcgggggaggtatgtgaatgcgttggtgacggatgaggtgacggcgcgt
gcaatcattaacttactttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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