KEGG   Yersinia pestis Z176003: YPZ3_2424
Entry
YPZ3_2424         CDS       T01210                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ypz  Yersinia pestis Z176003
Pathway
ypz00260  Glycine, serine and threonine metabolism
ypz00460  Cyanoamino acid metabolism
ypz00630  Glyoxylate and dicarboxylate metabolism
ypz00670  One carbon pool by folate
ypz00680  Methane metabolism
ypz01100  Metabolic pathways
ypz01110  Biosynthesis of secondary metabolites
ypz01120  Microbial metabolism in diverse environments
ypz01200  Carbon metabolism
ypz01230  Biosynthesis of amino acids
ypz01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:ypz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    YPZ3_2424 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    YPZ3_2424 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YPZ3_2424 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    YPZ3_2424 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    YPZ3_2424 (glyA)
Enzymes [BR:ypz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     YPZ3_2424 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase
Other DBs
NCBI-ProteinID: ADE65334
Position
3130880..3132133
AA seq 417 aa
MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANVAVYSALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGQIDYEDLARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIDAWFFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVAKNAKAMVA
VFLERGYKVVSGGTDNHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEATIERVKQKVLAICARLPVYA
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttaaagcgtgaaatgaacattgccgattacgatgcagatctgtggcgtgcaatggag
caagaagtcgtgcgtcaggaagaacacatcgaactgattgcgtctgagaactacaccagc
ccgcgtgttatgcaagcgcagggatctcagttaacgaacaaatatgctgaaggctatcca
ggcaagcgttattacggtggctgtgaatatgttgatgttgttgaacaattggcaatcgat
cgcgctaaagcattatttggtgctgattacgcaaacgttcaacctcattctggttcgcaa
gctaacgttgctgtttactccgcgctgctgaaacccggtgacaccgtattggggatgaat
ctggcacacggcggtcacttgacgcatggttcaccagtgaacttctccggcaaactctac
aacatcgtcccttatggtattgatgagtcgggtcaaattgattatgaagatctggcacgt
caggcagaaatacataaacccaaaatgattatcggtggcttctccgcctattctggtatc
gttgattgggcaaaaatgcgtgaaattgccgacagcattgacgcatggttctttgttgat
atggctcatgttgctggtctggttgctgcgggggtttatcctaacccggttccacatgcc
cacatcgttaccaccacgacgcacaagactctggctggcccacgtggcggtttgattctg
gcgaaagggggcgatgaagacttgtacaaaaaactgaactcttctgttttccctggtaac
cagggtggcccattgatgcatgttatcgcaggtaaagcggtcgcgctgaaagaagcaatg
gaacctgagtttaaaatttaccaacagcaagtggctaaaaatgcgaaagccatggtggcg
gtgttcttggagcgcggttacaaagtggtttctggtggtacggataaccacctgttcttg
ctagatttggtggataaagacatcaccggtaaagacgctgatgcggctttaggccgtgcg
aatatcaccgtgaacaaaaacagcgtacctaacgatccgaagagcccgtttgtgacatct
ggtgtgcgtattggtagcccagcgatcacccgccgtggcttcaaagaagcggaatcccgt
gaattggctggctggatgtgtgatgtgttagataacatcaacgatgaagcgaccattgag
cgtgtgaaacagaaagttctggctatctgcgctcgtttaccggtttacgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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