KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_05865
Entry
UGYR_05865        CDS       T03887                                 
Name
(GenBank) penicillin-binding protein 1C
  KO
K05367  penicillin-binding protein 1C [EC:2.4.99.28]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00550  Peptidoglycan biosynthesis
yrb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    UGYR_05865
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:yrb01003]
    UGYR_05865
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yrb01011]
    UGYR_05865
Enzymes [BR:yrb01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     UGYR_05865
Glycosyltransferases [BR:yrb01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   UGYR_05865
Peptidoglycan biosynthesis and degradation proteins [BR:yrb01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   UGYR_05865
SSDB
Motif
Pfam: Transgly BiPBP_C Transpeptidase
Other DBs
NCBI-ProteinID: AKA37964
Position
complement(1254365..1256701)
AA seq 778 aa
MNNPFLRRRRVWLALGFITLLLPAAVWLADRIWPLPLTEVQMARIVVAEDGSPLWRFADD
EGVWRYPVSIKHVSPYYLQALLTYEDRWFYQHPGVNPFSLARAAWQDLRAGKILSGGSTL
SMQVARLIEPHSRTLTGKLRQIWRTFQLEWHLSKDQILEIYLNRAPFGGTLQGIGAASWT
YLGKSPTNLTQAEAALLAVLPQSPSHLRPDRYPQRAKAARDKVLTRLAQYKVWPVDQVTE
IQQEDIWLAPRKVPQLAPLLARRLITGNKRDVIRTTLDAGLQRQLEDMAQGWRHQLPEKT
SLGILVVDHTTMEVKAYLGSVDFGDDSRFGHVDMISAWRSPGSTLKPFLYALALDDGLIH
GESLLQDVPRRFGDYRPGNFDTGFHGPVSASEALVRSLNLPAVQLLEAYGAKRLTANLRN
VGLRLRFPAHSEPNLALILGGTGSRLDQLVAAFSAFARGGMAGQLRFLPEQPLSQRRLFS
PGSAWIVRRIMAGEGRPVPDDVLPAVVPLAWKTGTSYGYRDAWALGLNARYTLGIWVGRP
DGTPVAGQFGYATAVPILHQVNNLLMSRLNQGHHALPTDPRPTSVSREEICWPGGQPLPS
GDTDCRQRRQSWVLDGTLPPTLAAAGQENIQGNQLSLWLNKQGQRVAADCPDATPVKLSL
WPLPLEPWLPLAERRAQRLPPVSQDCPPLTETDSPPLLILGIRNGATVQRLPGKNSLDLR
LEAQGGQGARWWFLNGEQIATTQNNQSWLQTLTVPGRYQLNVLDESGQVSKIEFQLLK
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgaataatccttttctgcgccgtcgccgtgtatggcttgctctggggtttattacgctg
ctattgccggcggctgtttggctggccgatcgcatctggccgttgccactgacggaggtg
caaatggcgcgaattgtcgtggcagaagacggttcgcctctgtggcgctttgccgatgat
gagggtgtatggcgttatcccgtcagtattaaacacgtttctccctactatttacaagcg
ttgctaacctacgaagatcgctggttttatcagcatcctggcgtaaatccattctctttg
gcacgagcagcctggcaagatttacgggcggggaaaattctctcaggcggcagtacacta
tcaatgcaggttgcccgcttgatcgaaccacattcgcgcactttgaccggaaaattgcgc
caaatatggcgtacttttcaactggaatggcatttatccaaagaccagattttagaaatc
tatttaaaccgcgcaccttttggcggaacattgcaaggaattggagccgccagttggact
tatctgggcaaatcacccaccaatctgactcaggccgaagccgcgctattggcggtgcta
ccgcagtcacccagccatttacggccggatcgctatcctcaacgtgctaaagctgcccgt
gacaaagtattaacccgcctggctcaatataaggtctggccggtagatcaggttactgaa
attcaacaggaagatatttggctcgcgccacgaaaagtgccgcaattggcaccgttattg
gcccgccgcctgatcactggcaataaacgcgacgtaatccgaacgacactggatgccggt
ttacagcgccaactggaagatatggcgcaaggatggcggcatcagctaccggagaagacc
tcacttgggattttggtggtggaccacaccacgatggaagtgaaggcttacctcggttcg
gtggattttggtgatgacagccgttttggccatgtcgatatgattagtgcttggcgatcg
cccggctcgacactcaaaccctttttgtatgctttggcgcttgatgatggcttgattcat
ggcgagtcattattacaggatgtgccacggcgttttggtgattatcggcccggcaatttt
gacactggatttcatggccctgtcagcgccagcgaggctttggttcgctccctaaatttg
cctgcggtgcaattactggaagcgtatggtgccaaacgattgactgccaatttacgtaat
gtgggtctcaggctgcgttttcctgcgcacagtgaacctaatctggcgttgattttagga
ggaaccggttcgcgtctggatcagttagtggcggcattcagtgcctttgcgcgcggcgga
atggccgggcaattgcgttttttgccagaacagcctttatctcagcgacgcttgttttcc
cccggatcggcgtggatcgtccgccgaatcatggctggggaagggcgaccggttcctgat
gatgtcctccctgccgtcgttccattggcgtggaaaaccggaaccagctacggttaccgc
gatgcttgggcacttggcctgaatgcccgctatacgttgggcatctgggttggacgccct
gacggcacaccggttgcgggtcagtttggctatgctacggcggtaccgattcttcatcag
gtcaataacctgttgatgtcgcgtttgaatcaagggcatcacgctttaccgacggatcct
cggcctacatcggtcagtcgggaggaaatttgttggccgggtgggcagccactgccaagt
ggtgatacggattgtcgtcagcgtcgtcaaagctgggtgttggatggcactctgccgcct
acattagcggctgcagggcaggagaatattcaaggcaaccagctaagtttatggttgaac
aaacagggtcagcgagtcgcggcggattgtccggatgcaacgccagttaaactctcttta
tggccgctgccgcttgaaccttggttaccgttggccgagcgtcgggcgcagcgcttgccg
ccggtcagtcaggattgtccgcctctgacggaaactgatagccctcctttattgattctg
ggtattcgaaatggtgcgacggtacagcgactaccagggaaaaatagcctggatttacgg
ttggaggctcagggagggcaaggtgcgcgttggtggtttcttaacggtgagcagattgcc
accacccagaacaatcaatcatggctgcaaaccctgacagtccctggccgctatcaactg
aatgttttggatgaaagtgggcaggtgagtaagatcgaatttcaactattaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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