KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13565
Entry
UGYR_13565        CDS       T03887                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yrb03016]
    UGYR_13565 (truD)
Enzymes [BR:yrb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     UGYR_13565 (truD)
Transfer RNA biogenesis [BR:yrb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    UGYR_13565 (truD)
 Prokaryotic type
    UGYR_13565 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AKA39321
Position
3019511..3020560
AA seq 349 aa
MDMENLTWLHGQPEASGVLKANPEDFVVVEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LSRFAKIHPRLVSYAGLKDRHAVTEQWFCLHLPGKETPDMAAFELEGCEVLETVRQKRKL
RIGSLKGNAFTLVLRHISNRQDVESRLNLIAAQGVPNYFGSQRFGRGGNNLVQVRRWANN
EIQVKERSKRSFYLSASRSAMFNLIASARLAEQRATQVLEGDALQLSGRGSWFVAQAEEL
ATLQQRLDAGELKVTAPLPGDGDLGTQGEALAFEQHCLTEQTELLSLMQRERVEGARRAI
LLQPQNMSWDWWDNVTLELHFWLPAGSFATSVVREIMRLDNGDAADLTE
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggatatggaaaatctgacatggctgcacggccagcccgaggctagcggcgtgttgaaa
gcgaaccctgaagatttcgtcgtcgtcgaagatctgggctttgagccagatggtgagggc
gaacatcttttagtgcgtatccgtaagaatggttgtaatacgcaattcgttgctgattac
ctatcgcgatttgccaaaattcatcctcggttggtgagttacgctggcttgaaagaccgc
cacgcggttacggaacaatggttctgtctgcatttgccaggtaaagaaacgccggatatg
gcagccttcgaactggaaggttgcgaggtgctggaaaccgtaaggcagaaacgtaaattg
cgtattggctcgctgaaaggtaatgcttttacgctggttttacgtcatatcagcaatcgt
caggatgtggagtcgcgcctgaatttaattgccgctcaaggcgttcccaactactttggt
agccaacgctttggtcgtggtggcaataatctggtgcaagtgcgccgctgggccaacaat
gaaattcaagtaaaagagcgcagcaagcgcagtttctatctgtcggccagccgcagcgcc
atgtttaacctgattgccagcgcccgtttagctgagcagcgcgcaacccaagtgctggaa
ggtgacgctttgcagcttagcggtcgtggtagctggtttgtcgctcaagcggaagagttg
gcaacgttacaacaacgtctggatgccggagagttgaaggttacggcaccgctgccgggt
gacggcgatttaggcactcaaggtgaggcgttggcttttgaacaacactgcctgaccgag
caaactgagctgttatcactgatgcagcgtgaacgcgttgaaggtgcgcgccgagccata
ttgctacagccacagaatatgagttgggactggtgggataatgtcacccttgagttgcac
ttctggttgcctgcgggcagttttgcaactagcgtagtcagagaaatcatgagattggat
aacggcgatgctgcggatcttactgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system