KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_14545
Entry
UGYR_14545        CDS       T03887                                 
Name
(GenBank) transcriptional regulator HU subunit alpha
  KO
K03530  DNA-binding protein HU-beta
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yrb03032]
    UGYR_14545
   03036 Chromosome and associated proteins [BR:yrb03036]
    UGYR_14545
   03400 DNA repair and recombination proteins [BR:yrb03400]
    UGYR_14545
DNA replication proteins [BR:yrb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    UGYR_14545
Chromosome and associated proteins [BR:yrb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    UGYR_14545
DNA repair and recombination proteins [BR:yrb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      UGYR_14545
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AKA39483
UniProt: A0A085U5A9
Position
3230848..3231120
AA seq 90 aa
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKAGDDVALVGFGTFAVRERSARTG
RNPQTGKEISIPAAKVPGFRAGKGLKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataagtcacaactgatcgacaaaattgccgcaggtgctgatatttctaaagcggcc
gctgggcgcgcgttagatgcaattattgcttctgttactgaatccttgaaagcaggggat
gatgtagctctggttggtttcggtacttttgcagtacgtgagcgctctgcccgtactggc
cgtaaccctcagaccggtaaagaaatcagtattccagctgctaaagttccaggtttccgt
gcaggtaaaggtctgaaagacgcggtcaactaa

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