KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_15145
Entry
UGYR_15145        CDS       T03887                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00550  Peptidoglycan biosynthesis
yrb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    UGYR_15145
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:yrb01002]
    UGYR_15145
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yrb01011]
    UGYR_15145
Enzymes [BR:yrb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     UGYR_15145
Peptidases and inhibitors [BR:yrb01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   UGYR_15145
Peptidoglycan biosynthesis and degradation proteins [BR:yrb01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   UGYR_15145
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase
Other DBs
NCBI-ProteinID: AKA39580
UniProt: A0A085U5P1
Position
complement(3366044..3367255)
AA seq 403 aa
MKYVTTPRFIKSIALGTVIVISATSVANADDVNMKTMIPGVPQIDAEAYVLIDYNSGKVL
AEMNADARRNPASLTKMMTSYVIGQAIKSGKIGPEDMVTVGKDAWATGNPVFQGSSLMFL
KPGDQVPVSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYVNALGLKNTHFKTVH
GLDAEGQYSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQMNRNGLLWDTSLNVDG
IKTGHTDAAGYNLVASATEGQMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKV
GKEFASEPVWFGDTDRVQLGVDQDVYLTIPRGRMKDLKASYVLNTPEIHAPLAKNQVVGS
INFQLDGKTIDQRPLVVMNEVKEGGIFSRMVDYIKLMFHHWFG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaaatatgtaactacccctcgttttatcaagagcatagcgctcggcaccgttatcgtc
ataagcgcaacttccgttgccaacgccgatgacgtcaatatgaaaaccatgattcccggc
gtgccacaaatcgacgcggaagcttatgtactgattgactacaactccgggaaagtattg
gcagaaatgaatgccgatgcgcgccgcaaccctgccagtctgactaaaatgatgaccagt
tatgttattggtcaggcaatcaaatcaggcaaaatcggccccgaagatatggttaccgtc
ggtaaagatgcctgggcgactggcaacccagtgttccaaggctcatcattgatgttcctg
aaacctggcgatcaggttcccgtatccaagctaactcgtggtatcaatcttcaatcaggt
aatgacgcttgtgtcgctatggccgattatgttgctggcagccaagattccttcgtgaat
ctgatgaataactacgtcaacgcgctaggcctgaaaaatacccacttcaaaacggttcac
ggcctggatgctgaaggtcaatacagctccgcgcgcgatatggcgttgattggtcaggcg
ttgattcgtgatgttccagacgaatatgccatctacaaagaaaaagaatttaccttcaat
aacatccgtcagatgaaccgtaacggcttactgtgggataccagtctgaatgtcgacggc
atcaaaaccggtcatactgatgctgcgggttataacttggtggcatccgccactgaaggc
cagatgcgcctgatttcagccgtacttggtggtcatacttataaaggccgtgaaaccgaa
agcaaaaaactgctgacctggggcttccgtttctttgaaaccgtagcaccattgaaagta
ggcaaggaatttgcttctgaacccgtttggttcggcgataccgatcgcgtacagttaggc
gtagatcaagacgtttacctgacgattccacgtggccgaatgaaagaccttaaagccagc
tatgtgctgaataccccagaaattcatgcaccactggccaagaatcaggttgttggcagc
attaacttccaactggatggcaaaactatcgatcaacgcccactggtggtgatgaacgaa
gtgaaagaaggcggtatcttcagccgcatggtcgattatatcaaactgatgttccatcat
tggttcggttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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