KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_15415
Entry
UGYR_15415        CDS       T03887                                 
Name
(GenBank) deoxyribodipyrimidine photolyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yrb03400]
    UGYR_15415
Enzymes [BR:yrb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     UGYR_15415
DNA repair and recombination proteins [BR:yrb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    UGYR_15415
 Prokaryotic type
    UGYR_15415
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Transposase_31
Other DBs
NCBI-ProteinID: AKA39627
UniProt: A0A085U492
Position
3425043..3426482
AA seq 479 aa
MATHLIWFRHDLRVTDNLALHAACQDPQAQVIAVFIATPQQWAAHNMSPKQATFIQQNLQ
CLQQALALRSIPLYYHQCHDFDASRRWLAAFSREKQVDKLFYNHQYELNERRRDAELEDS
LRGQVACQGYHDSLLLAPGSVLTGNGDMYKIYTPFRRAFIQRLLISDCQCVPAPRARGEP
ITTIQPLAPFDYPTENVDSVLFPAGEEAALQRLRQFCREPVRDYHQQRDLPAIAGTSQLS
PYLAIGQLSPRQCFNRLRVECPDMLEQPDSGAFSWLNELIWREFYRHLLVAYPRLCQHRP
FIGWTDEVRWNTDAERLQAWQQGMTGYPIVDAAMRQMNATGWMHNRLRMITASFLVKDLL
VDWRQGERYFMSKLLDGDLAANNGGWQWAASTGTDSAPYFRIFNPTTQGERFDKHGVFIR
HWLPELAAVPASDIHQPWRWAQRQQQHLDYPLPMVDHKQARLDTLAAFEAARRFHPQKS
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggccacccacctaatctggtttcgtcatgacctgcgtgtcacggataatctggcactg
cacgccgcttgtcaggatccgcaggctcaggtgatcgcggtatttattgctacgccacag
cagtgggccgctcataatatgtcgccaaagcaagcaacctttatccagcaaaatctacaa
tgtttacagcaggcgctcgctttgcgcagtatccctttgtattaccaccaatgccatgat
tttgatgcctcgcggcgttggttagcggctttcagccgggaaaaacaggtcgataaactg
ttttataatcatcaatatgaattgaatgaacggcgacgtgatgctgaactggaagacagt
ttgcgcgggcaagttgcctgtcagggatatcacgacagcctactattggcacctggtagc
gtactgactggaaacggcgatatgtataagatttataccccgtttcgccgcgcttttatt
caacgcttattaataagtgattgccagtgtgtaccagcaccgagagctcgtggagagccg
attaccaccatccagccacttgcgccgttcgactatccgactgaaaacgtggatagcgtc
ctgtttccagcaggagaagaggcggcattgcagcgtttgcgtcagttttgccgggaaccg
gtgcgggattatcaccaacagcgagatttgccagccattgccggaaccagccagttatcg
ccttatctggcaatcgggcaattatcccctcgtcagtgctttaaccggctgagggttgaa
tgccctgatatgttggaacagccagatagcggtgcctttagctggcttaatgaactgatt
tggcgtgagttttatcggcatctcttggtcgcttatccgcgattatgccagcatcgccca
tttattggctggacggatgaggtacgatggaacactgacgcagagaggctacaggcatgg
caacagggcatgaccggttatccgattgttgatgcagctatgcgccagatgaatgctact
ggatggatgcataatcggctgcgaatgataacggccagttttttggtcaaagatttattg
gtggattggcgtcaaggcgagcgttatttcatgtccaaattgttagacggtgatctggct
gccaataacggcggttggcaatgggcagcatccactggcacggattcggcaccttatttt
cgtattttcaacccgacaacccaaggggagcgattcgataaacacggtgtctttatccgt
cactggttacctgagttagcggcggtaccagccagtgatattcatcaaccttggcgttgg
gcgcagcggcaacagcaacatctggactatccgttgccgatggttgatcacaagcaagcc
agactggataccctggctgcatttgaggccgccagacggtttcatccccaaaagagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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