KEGG   Yokenella regensburgei: HEC60_22220
Entry
HEC60_22220       CDS       T06519                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
yre  Yokenella regensburgei
Pathway
yre03030  DNA replication
yre03430  Mismatch repair
yre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HEC60_22220 (dnaQ)
   03430 Mismatch repair
    HEC60_22220 (dnaQ)
   03440 Homologous recombination
    HEC60_22220 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yre03032]
    HEC60_22220 (dnaQ)
   03400 DNA repair and recombination proteins [BR:yre03400]
    HEC60_22220 (dnaQ)
Enzymes [BR:yre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HEC60_22220 (dnaQ)
DNA replication proteins [BR:yre03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HEC60_22220 (dnaQ)
DNA repair and recombination proteins [BR:yre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HEC60_22220 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 vATP-synt_AC39
Other DBs
NCBI-ProteinID: QIU91839
UniProt: A0A6H0KER4
Position
4623787..4624518
AA seq 243 aa
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGRNFHVYLKPDRLVDP
EAFNVHGIADEFLLDKPTFGDVADEFIEFIRGAELVIHNASFDIGFMDYEFGKLNRDIPK
TNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNTKRTLHGALLDSQILAEVYLAMTG
GQTSMKFSVEGESRQQAGDTGIQRVVRAASNLRVILASDEELVNHESRLDLVQKKGGSCL
WRA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagcactgcaattacacgccagatcgtactcgataccgaaaccaccggtatgaatcag
attggcgcccattatgaagggcataaaatcatcgaaatcggtgccgtcgaggtgattaac
cgtcgcctgaccggcaggaatttccacgtctatcttaagcccgatcggctggtggatccg
gaggcattcaacgttcacgggattgccgatgaattccttctcgacaaaccgacgtttggc
gatgtggccgatgagttcattgagtttatccgtggcgcagaactcgtcatccacaacgcg
tcgttcgatatcggctttatggactacgagttcggtaagctgaatcgcgatattccgaaa
accaacaccttctgcaaagtgaccgacagcctggcgctggcgaggaaaatgttccctggc
aagcggaacagcctcgatgcgctctgctcgcgttatgaaatagacaacaccaaacgtacg
ctccacggggcgttgcttgactcccaaattctggcagaagtttatctggcgatgaccggt
ggtcaaacgtcgatgaagttttcggtggaaggggagtcccgtcagcaggccggagatacc
ggaattcagcgcgttgtacgtgcagccagcaatctacgggtgattttagccagtgatgaa
gagctggttaaccatgaatcccgcctcgatctggtgcaaaagaaaggtggaagctgtctc
tggcgcgcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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