KEGG   Yersinia rohdei: CH64_1699
Entry
CH64_1699         CDS       T03610                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
yro  Yersinia rohdei
Pathway
yro03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CH64_1699 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yro03400]
    CH64_1699 (recB)
Enzymes [BR:yro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CH64_1699 (recB)
DNA repair and recombination proteins [BR:yro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CH64_1699 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11
Other DBs
NCBI-ProteinID: AJJ11663
Position
complement(1872294..1875923)
AA seq 1209 aa
MTSRTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGAAAFQRPLMVEEI
LVVTFTEAATEELRGRIRDNIHELRIACVRGVSDDPMHTALLAEITDLSEAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPLAV
ARAVSQEWSGPEALLKDLSAYLQGETPKFRQAPDEDETLLSRHQQIVVQIDAVKAQWRVA
AHELEPLISGSGVDKRSYSTKHLPNWLDKVGIWAEQETGDYQLPKELEKFRQSVLFEKTK
KGAAPQHALFNAIDHLFEQPLTLRDLILARAISEIRETVQQEKRQRAELGFDDLLSKLDA
ALQQPGGELLAQTIRTRYPVAMIDEFQDTDPQQYRIFHTLYGGQGDCGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLETNWRSSFPMVQSVNRLFSLVKVPFLFEQIPFINVTP
AKRNSRLSFEIKGKKQPAMSFWLQPGEGVGVSEYQQLMARQCAAQIRDWLTAGQQGLAQL
VTASSSRAVQASDITILVRSRAEAALVRNALSVLAIPSVYLSNRDSVFDTAEAKDLLWVL
QAVVAPEQERALRSAMATGMLGLDAKMLDGLNHDERAWDALVDEFDGYRQHWQRRGVLPM
LREMMSRRHLAENLLATPGGERRLTDLLHLGELLQEAASQLDSEHALIRWLAQQIAQPNP
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVGNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSLGIAPLIKGGRKKQGDSDMHLSALGY
LVQQGQVGNAQYLGEKLAELAALAGGDISVSHAGQLDETPWQPKTADLPALAACQFSRQV
HDYWRVTSYSGLQQQGSSKGSISPPLNVLLQELLPRLDTDAAGEQAPITEAQFTPHTFPR
GAAPGTFLHDLLEPLDFSQPIEQAWLTEQLQLQGFGEQWSDMLYQWLNDIVQVPLNETGV
TLAGLTPQSKQAELQFYLPIDSLLQARELDTLIKHYDPLSRQCPALDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTAEAMAQAMAEHRYDLQYQLYTLALHRYLRHRLG
DYDYHRDFGGVIYLFLRGVDKQHPGNGIFSCRPERELIEGMDSLFSGREIDRHLSDINSV
APTDEGTSI
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgacatcaaggactccccagcggctggaaccgctaacgctgcccttgtatggcgaaagg
cttattgaagcttcagctggtaccggtaaaacctttaccatcggggtactttatctcaga
ttgttgctggggttaggtggggcggcggcgtttcagcggcccttgatggtagaggaaatc
ctggtggtgacctttaccgaagccgcaactgaagagttaagggggcggatccgcgataat
attcatgaattgcggattgcgtgcgtgcggggagtcagtgatgacccaatgcatacagct
ttattagctgaaatcaccgatttgagtgaggccgcagcacagttgttggcggctgaacgc
caaatggatgaggccgcaatttataccattcacggcttttgtcagagaatgttggcaaat
aatgcatttgaatctggcattttatttgagcaaacattggtgcaggatgaattgccattg
cgcaggcaagcctgtgctgacttctggcgacgtcattgctatccgctgccattggctgtc
gcaagagcggtaagtcaggaatggagtggcccggaagctctgctcaaagacctttctgct
tatttacagggcgagacaccaaagtttcgccaagcgcccgatgaggatgaaacattactc
agtcggcatcagcaaatagtggtgcaaattgatgcagttaaagcgcaatggcgtgttgct
gcacatgagttagagccattaattagcggctctggtgttgataagcgcagctacagtacc
aaacatttacctaactggctggataaagtaggtatctgggccgaacaagaaaccggtgat
tatcaattacctaaagaactggaaaaatttcgccaatcagtcttatttgaaaaaaccaaa
aaaggggcggccccccaacatgctctattcaatgcgatagaccacctgtttgagcaacct
ctgacgttaagagatctaattttagccagagcaatcagtgagatacgagaaaccgtccaa
caggaaaaacgccaacgggcagaactggggtttgatgatttgctcagtaaactggatgcg
gcgttacagcaaccgggtggcgagctattggctcaaactattcgtactcgttatcccgtc
gcaatgattgatgagtttcaggataccgacccacaacaataccgtatttttcataccctc
tatggcggtcagggtgattgcggtttattgctgattggcgatcctaaacaggccatttat
gctttccgtggtgcagatatctttacctatattcgtgctcgctctgaagtaagtgcccac
tacacgctagagacaaactggcgttcgtctttcccgatggtgcaatcagttaaccggctg
tttagtttggtcaaggttccgttcttatttgagcaaatcccatttataaatgtgacccct
gctaaaagaaatagccggctatcatttgaaataaaagggaaaaaacaacccgcaatgtct
ttctggttacaaccaggtgaaggggttggcgttagtgaataccaacaactcatggcgcgg
caatgtgcagctcaaatccgggactggttaactgcgggtcagcaagggctggctcaatta
gtgaccgcatcaagctcaagagcggttcaggcgtcggatatcaccatattagttcgcagc
cgggcagaggcagcactggtgcgtaatgcgctaagtgttttggctattccatcggtttat
ttatctaatcgtgacagtgtgtttgataccgcagaagccaaagatttattgtgggtatta
caagccgttgtggcaccagagcaggagcgggcattacgtagtgctatggctacgggcatg
ctggggctggacgctaaaatgctggacggcttgaaccatgatgagcgggcttgggatgca
ttggtggatgagtttgatggttatcgccagcattggcagcgccgtggcgtgctgcccatg
ttacgggagatgatgtctcggcgtcatttagctgaaaacctgttagccacaccagggggg
gagcgccggttaaccgatttgctgcatcttggggagttactacaagaagccgcatcacag
cttgatagtgagcacgcactaatccgctggctggcacagcaaatagcgcagccaaaccct
cagtcagacaaccaacaactccgtttggaaagtgatcgccatttggttcaggtcattact
atccataaatcgaaagggttggaatacccattagtgtggctgcctttcgtgggtaatttc
cgccagcagcaggatgtgctttaccatgatcgccacagctttgaagcattacttgacctg
aatgcagatgaagaaagtcaggctttggcggaagaagaacgtttagccgaagacttaagg
ctattatatgttgctctcactcgtgcggtttatcattgtagtttaggtattgcgccgctg
attaaaggcgggcggaaaaagcagggtgacagtgacatgcatctcagtgccttaggctat
ctggtgcaacaggggcaggtgggaaatgctcaatatctgggcgaaaaacttgctgaacta
gccgcactcgcggggggagatatttctgtttctcatgcggggcaactggatgaaaccccc
tggcagccgaagaccgcagatttacccgcactggccgcgtgtcagtttagtcggcaagta
catgattattggcgtgttaccagttactctgggcttcagcagcagggttccagtaagggc
agcatatcaccgccattaaatgtgctattgcaagagttattgccacggctggacacagat
gcagccggtgaacaggccccaataaccgaggcgcagtttactcctcataccttcccacgt
ggtgccgcaccggggactttcctacacgatttactcgaacccttggattttagccagccg
attgaacaggcgtggcttaccgaacaattgcagctgcaaggatttggcgagcaatggtca
gatatgctgtatcagtggctaaatgacattgtacaagtcccactaaatgaaaccggggtg
acactggcaggattgacgccacagagcaagcaggcagaattacaattttatctgccaatt
gattctttgctgcaagcccgcgagctagacaccttaatcaaacactatgacccattgtcc
cgccagtgtcctgcattggattttcagcaagtccgggggatgctcaaagggtttattgac
ctggttttctgttggcagggcaagtattacttgctggattacaaatccaattggctgggg
gaagacagcagtgcttataccgccgaggcgatggctcaagctatggccgagcaccgctat
gatttgcaataccaactttatactctggcattacaccgctatttgcgccatcggttgggc
gattatgattatcaccgcgattttggtggtgtcatttatctcttcctgcgtggcgtcgat
aaacaacatccggggaatggtatttttagttgtcgcccagagcgggagttgattgaaggc
atggactctttattcagcggtcgtgaaatagaccggcatctcagcgatataaatagtgtt
gctccaacggatgagggcacatcaatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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