KEGG   Yersinia rohdei: CH64_2659
Entry
CH64_2659         CDS       T03610                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
yro  Yersinia rohdei
Pathway
yro00540  Lipopolysaccharide biosynthesis
yro01100  Metabolic pathways
yro01250  Biosynthesis of nucleotide sugars
Module
yro_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:yro00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    CH64_2659 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:yro01005]
    CH64_2659 (rfaD)
Enzymes [BR:yro01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     CH64_2659 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:yro01005]
 Core region
  CH64_2659 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 ThiF adh_short
Other DBs
NCBI-ProteinID: AJJ10635
Position
complement(2965098..2966030)
AA seq 310 aa
MIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDLDIADYMDKEDFVASI
VAGDDMGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRSIPFLYASSAATY
GGRTDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPQAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGENPKLFSGSENFKRDFIYVGDVADVNLWFWQNSVSGIFNCGTGRA
ESFQAVADAVVDFHHSGPVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVK
EYLTWLNRSV
NT seq 933 nt   +upstreamnt  +downstreamnt
atgattatcgtcactggcggcgccggttttattggcagcaatatcgttaaggcactgaat
aatatcggttataaagatattttggttgtagacaatctgaaagacggcaccaaattcgtc
aatctggttgatctggatatcgctgattacatggataaagaagattttgtcgccagcatt
gtcgccggtgatgatatgggtgatatcgacgcgattttccacgaaggtgcttgttcttcc
accaccgagtgggatggcaagtatatgatggataacaactatcagtactcaaaagatatc
ctgcacttctgtctggatcgcagcattccgttcctatatgcctcatctgctgccacctat
ggcggccgtactgataacttcattgaagatcgtcaatacgaacagccacttaacgtttac
ggttattctaaattcctgtttgatcagtatgtgcgtgaaatcctgccgcaagctgaatca
cagatttgtggattccgttacttcaacgtttatggcccacgtgaaggccacaaaggcagc
atggccagcgttgccttccacctgaataaccagatcaatgcgggtgaaaaccctaaattg
ttctctggcagtgaaaatttcaaacgcgatttcatctatgtgggtgatgtggctgacgtt
aatctgtggttctggcaaaacagcgtatctggcattttcaactgcggtaccggccgtgca
gaatccttccaggctgttgccgatgccgtggtggatttccaccacagcgggcctgtggaa
tacattgaattcccagaaaaactgaaaggccgctatcaggcatatacgcaagctgacctg
actaatttgcgtgctgccggttatgacaagccattcaaaactgtcgctgaaggcgtcaaa
gaatatctgacctggcttaatcgctcagtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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