KEGG   Yersinia ruckeri YRB: BD65_1056
Entry
BD65_1056         CDS       T03611                                 
Name
(GenBank) beta-eliminating lyase family protein
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
yru  Yersinia ruckeri YRB
Pathway
yru00260  Glycine, serine and threonine metabolism
yru00460  Cyanoamino acid metabolism
yru00630  Glyoxylate and dicarboxylate metabolism
yru00670  One carbon pool by folate
yru00680  Methane metabolism
yru01100  Metabolic pathways
yru01110  Biosynthesis of secondary metabolites
yru01120  Microbial metabolism in diverse environments
yru01200  Carbon metabolism
yru01230  Biosynthesis of amino acids
yru01240  Biosynthesis of cofactors
Module
yru_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:yru00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BD65_1056
  09102 Energy metabolism
   00680 Methane metabolism
    BD65_1056
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BD65_1056
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    BD65_1056
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    BD65_1056
Enzymes [BR:yru01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     BD65_1056
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1
Other DBs
NCBI-ProteinID: AJI96413
Position
complement(1157369..1158622)
AA seq 417 aa
MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDDMARQAELHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAWLFVDMAHVAGLVAADVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSSVFPANQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVAKNAKAMVS
VFLARGYKVVSGGTENHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEAESIELAGWMCDVLDNINDEATIERIKQKVLEICACFPVYA
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttaaagcgtgaaatgaacattgccgattatgatgccgatttatggcgtgcaatggag
caagaagtggtgcgccaggaagagcacatcgaactgattgcgtctgagaactataccagc
ccgcgtgttatgcaggcgcaaggttctcagttgacgaacaaatatgctgaaggttatccg
ggcaagcgttactacggtggctgtgagtatgttgatgtggttgagcaattggccatcgac
cgtgcgaaagaactatttggtgctgattatgccaacgtgcagccgcactccggttcacag
gctaacgtggccgtttattccgcattgttgaagccgggcgacaccgtattgggcatgaat
ctggcacatggcggccatttgacgcacggctctccggtaaacttctccggtaaactgtat
aacatcgtaccttacggtattgatgagtctggcaagatcgattatgacgatatggcgcgt
caggcagaactgcataaaccaaaaatgatcatcggtggcttctcggcctattccggtatc
gttgactgggcaaaaatgcgtgaaatcgccgacagcatcggtgcatggttgtttgtcgat
atggcccacgtggccggtctggtcgctgcggatgtttatccgaaccccgttcctcacgca
catattgttaccaccacgactcacaaaacgctagctggtccacgcggtggtctgattttg
gcgaaaggtggcgacgaagagctgtataagaaactgaactcttctgtattcccggctaac
cagggtggcccactgatgcacgttatcgcgggtaaagcggtggcgttgaaagaagcgatg
gagcctgagttcaagatttaccagcagcaagtagccaaaaacgccaaagcaatggtgtcg
gtcttcttggcgcgtggttacaaagtggtgtccggcggtacggaaaaccacttgttcttg
ctggatctggtcgataaagacatcaccggtaaagatgcggatgcagccttgggtcgtgcc
aatatcaccgtgaataaaaacagcgtgcctaacgatcctaagagcccgtttgtgacttcc
ggtgtgcgtatcggttctccggctattacccgtcgtggtttcaaagaagcagaatccatc
gaactggctggctggatgtgtgatgtgttggataacatcaacgacgaagcgactatcgaa
cgtatcaaacagaaagttctggaaatttgcgcctgtttcccggtttacgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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