KEGG T03611: BD65

Yersinia ruckeri YRB: BD65_1560

Entry

BD65_1560         CDS       T03611

Symbol

fis

Name

(GenBank) DNA-binding protein fis

K03557

Fis family transcriptional regulator, factor for inversion stimulation protein

Organism

yru Yersinia ruckeri YRB

Brite

KEGG Orthology (KO) [BR:yru00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yru03000]
    BD65_1560 (fis)
   03036 Chromosome and associated proteins [BR:yru03036]
    BD65_1560 (fis)
   03400 DNA repair and recombination proteins [BR:yru03400]
    BD65_1560 (fis)
Transcription factors [BR:yru03000]
Prokaryotic type
  Helix-turn-helix
   Other families
    BD65_1560 (fis)
Chromosome and associated proteins [BR:yru03036]
Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BD65_1560 (fis)
DNA repair and recombination proteins [BR:yru03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      BD65_1560 (fis)

SSDB

Motif

Pfam:

HTH_8 Phage_NinH HTH_30 HTH_28

Other DBs

NCBI-ProteinID:

AJI95055

UniProt:

A0A085UAW6

Position

1700296..1700592

AA seq 98 aa
MFEQRVNSDVLTVATVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVSDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN

NT seq 297 nt +upstreamnt +downstreamnt
atgttcgaacaacgcgtaaattctgacgtactgaccgttgcaaccgtaaactcacaagat
caggtgactcaaaagcctttgcgtgactcggttaaacaagcactgaagaactattttgct
caactgaatggtcaagatgtaagtgacctgtatgagttggtactggctgaagttgaacag
ccattgttggacatggtgatgcaatacacccgtggcaaccaaacccgtgcggccctgatg
atgggtatcaaccgcggtacgctacgtaagaaattgaaaaaatacggcatgaactga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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