KEGG   Yersinia ruckeri YRB: BD65_2233
Entry
BD65_2233         CDS       T03611                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
yru  Yersinia ruckeri YRB
Pathway
yru03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:yru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BD65_2233 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yru03021]
    BD65_2233 (rpoA)
   03400 DNA repair and recombination proteins [BR:yru03400]
    BD65_2233 (rpoA)
Enzymes [BR:yru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BD65_2233 (rpoA)
Transcription machinery [BR:yru03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BD65_2233 (rpoA)
DNA repair and recombination proteins [BR:yru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BD65_2233 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AJI96345
UniProt: A0A085U6T0
Position
2444763..2445752
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaaggaaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcaacatgtgatctgccacctgaccgatgaaaacgcatctatt
agtatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtctgttagtagatgcatgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacttggacaag
ctggtcatcgagatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacaacttgaagctttcgttgacctacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagttcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtacttgcttcacgtggtctgtcactaggcatgcgcctggaaaac
tggccgccggcaagtattgctgacgagtaa

DBGET integrated database retrieval system