KEGG   Yersinia ruckeri YRB: BD65_238
Entry
BD65_238          CDS       T03611                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
yru  Yersinia ruckeri YRB
Pathway
yru03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:yru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BD65_238 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yru03400]
    BD65_238 (xth)
Enzymes [BR:yru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BD65_238 (xth)
DNA repair and recombination proteins [BR:yru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BD65_238 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3
Other DBs
NCBI-ProteinID: AJI95614
Position
complement(265624..266430)
AA seq 268 aa
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK
GHYGVALLTKQKPLAVRRGFPTDEEDAQRRIIMADLATPQGILTVINGYFPQGESRDHPT
KFPAKARFYRDLQNYLAQELTPEAQVLIMGDINISPTDRDIGIGEDNRKRWLRTGKCSFL
PEEREWLERLQNWGLVDTFRAANPDCEDRYSWFDYRSRGFDENRGLRIDVLMASKPLAER
CIATGIDYDIRSMEKPSDHAPVWSEFSL
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaaatttgtctcttttaatatcaatgggctacgagcccgtcctcaccaattagcggcg
atcatcgaacaacaccaacccgatgtcattgggttacaagagactaaagttcacgatgat
atgttccctctcgaagaagtcagtcagcatggttaccacgtgttctatcacgggcaaaaa
ggccattatggcgttgctttgctgacaaaacaaaagcctctggccgttcgtcgcggtttt
ccaaccgatgaagaggatgcacagcgcagaatcatcatggccgatctagccacaccacaa
gggatattaaccgtaattaacggttatttccctcagggggaaagtcgcgaccatccgacc
aaatttcctgctaaagcccgtttctatcgtgatctgcaaaactatctggcacaggaatta
accccggaagcgcaggttttaattatgggtgacattaatatcagcccaacggatcgtgat
attggtatcggtgaagataaccgtaaacgttggttgcgcaccggtaaatgttcgttcttg
ccagaagagcgtgaatggctggaacgcctacaaaactggggattggtggatacgttccgc
gccgcgaatcctgattgtgaagatcgttattcctggttcgattaccgttcccgcggtttt
gatgaaaaccgtggcctgcgtattgatgtattgatggcaagtaaacctttggctgaacgt
tgtattgcaaccggtattgattacgatattcgcagtatggaaaaaccatcggatcatgcg
ccagtgtggtcggagttctcgctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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