KEGG   Yersinia ruckeri YRB: BD65_2614
Entry
BD65_2614         CDS       T03611                                 
Name
(GenBank) peptidase Do family protein
  KO
K04771  serine protease Do [EC:3.4.21.107]
Organism
yru  Yersinia ruckeri YRB
Pathway
yru01503  Cationic antimicrobial peptide (CAMP) resistance
yru02020  Two-component system
Brite
KEGG Orthology (KO) [BR:yru00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BD65_2614
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    BD65_2614
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:yru01002]
    BD65_2614
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:yru03110]
    BD65_2614
Enzymes [BR:yru01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.107  peptidase Do
     BD65_2614
Peptidases and inhibitors [BR:yru01002]
 Serine peptidases
  Family S1: chymotrypsin family
   BD65_2614
Chaperones and folding catalysts [BR:yru03110]
 Other chaperones and cochaperones
  DegP / HtrA
   BD65_2614
SSDB
Motif
Pfam: Trypsin_2 PDZ Trypsin PDZ_2 PDZ_6 DUF3394 Peptidase_S46
Other DBs
NCBI-ProteinID: AJI96510
Position
2888467..2889900
AA seq 477 aa
MKKTTLVLSALALSIGFAMGPVSAVAAETASSSTQQLPSLAPMLEKVMPSVVSINVEGSA
PVQNAGMPDQLQQFFGGNSPLCQEGSPFQGSPFCQGGPGTNGGDQPSQKAFRGLGAGVII
DATKGYVVTNNHVVENASKIQVQLNDGRKFDGKVIGKDPRTDIALIQLKDFKNLTAIKLA
DSDQLRVGDYTVAIGNPYGLGETATSGIVSALGRSGLNVENYENFIQTDAAINRGNSGGA
LVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTAQMVEFGQVKRGELGIMGTELN
SELAKAMNVDAQKGAFISQVLPKSSAAKAGIKAGDVIVTMNGKAISSFAAFRAEIGTLPV
GSKMTLGLLRDGKPLTVDVTLEQSTQAQVESGNIYTGIEGAELNNFDSAGKKGVKVDNVK
PGTAAARIGLKKGDIIVGVNQKSVQNLGELRKILDSKPPVLALNITRGDATIYLLMQ
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaaaaaaactacgttagtgttaagtgcattggcattaagtatcggtttcgccatgggg
ccggtctctgccgttgccgcagaaaccgcctcgtccagcacccagcagctccctagcttg
gcaccgatgttagagaaggttatgccgtcggtggtcagtatcaatgtagaaggcagcgca
ccggtgcaaaatgctgggatgccggatcaacttcaacaattctttggcgggaactctccg
ctgtgccaggaaggatctcctttccagggatcgccattctgccaaggcggaccgggcacc
aacggtggtgatcagccaagccagaaagcttttcgcgggttgggagccggtgtcattatt
gacgcgactaaaggttatgtcgtcaccaataatcacgtggtagaaaatgccagcaaaatt
caggtgcagctgaatgatgggcgtaaatttgatggcaaagtgatcggtaaggatcctcgt
accgatatcgctctgatccagctcaaagactttaaaaacctgaccgcgattaaactggcc
gattccgatcaactccgcgtgggcgattatacggtagcgataggtaacccttatggctta
ggggaaaccgctacctcgggtattgtttcggcattggggcgcagtggcctgaatgtggaa
aattatgagaactttatccagacagatgcggcgattaaccgtggtaactccggcggtgcc
ttggttaacctgaacggtgagctgatcgggattaataccgcaattttggcaccggacggc
ggcaacatcggcatcggttttgctattccgagcaatatggtgaaaaacctgacggcgcag
atggtggagttcggtcaggtaaaacgtggtgaactcggcattatgggcactgagctgaat
tccgaattggctaaggcgatgaatgtggatgcacagaaaggtgcctttatcagtcaggta
ttgccgaagtcttcagctgctaaagccggaattaaagccggtgacgtgatcgtcaccatg
aacggtaaggccatttccagttttgcggccttccgtgctgaaatcggtactctgccggtg
ggcagtaaaatgacgttgggtttgctgcgggacggtaagccgctgaccgtggatgtgacg
ctggagcaaagcactcaggcacaggttgaatccggcaatatttatactggtattgaaggc
gctgaactgaataactttgattctgctggcaagaaaggagtgaaggttgataatgtgaaa
cctggcactgctgctgcacgcatcggcttgaaaaaaggagatattatcgttggtgttaac
cagaaatcggtacagaatctaggcgagttacgcaagattctcgacagcaaaccaccggta
ttagcgttaaatattacccgtggtgatgccactatttacctgttgatgcagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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