KEGG T03611: BD65

Yersinia ruckeri YRB: BD65_289

Entry

BD65_289          CDS       T03611

Name

(GenBank) pseudouridine synthase family protein

K06178

23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]

Organism

yru Yersinia ruckeri YRB

Brite

KEGG Orthology (KO) [BR:yru00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yru03009]
    BD65_289
Enzymes [BR:yru01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     BD65_289
Ribosome biogenesis [BR:yru03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BD65_289

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AJI95904

Position

321011..321976

AA seq 321 aa
MSEKLQKVLARAGHGSRREIEAIIQQGRVSVDGKVATLGDRVDVTPSTKIRLDGRILSIT
ESEEAVCRVLAYYKPEGELCTRSDPDGRPTVFDRLPKLRGSRWVAVGRLDVNTSGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQIDDEKIKLLSRGVQLEDGPAAFRTISFQGGEGL
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDINLPKGLPRGGWTELDLKATNYL
RELVELDVETVSKLPVEKDRRRVKANQIRRAVKRHTEVAGRQQTAGRQGSARKGSTRQNA
GNTASSGAPVSGRRSAPAKRG

NT seq 966 nt +upstreamnt +downstreamnt
atgagcgagaagttacagaaagttctggcgcgtgccggtcatggttcacgccgtgaaatt
gaagctattatccaacagggtcgcgtcagcgttgacggtaaagtggccacgttgggcgat
cgcgttgacgtgacgccatcgaccaagatccgcctggatggccgcattctgtcgattacc
gaatcggaagaagcggtatgccgggtattagcctattacaaacctgaaggggagctatgt
acccgtagcgatccagacggtcgtccgacggtatttgaccgcctgcctaaactgcgtggt
tcgcgttgggtcgcggtaggtcgtttggacgtcaatacctcgggtttattactgttcacc
accgatggtgaactggctaatcgcctgatgcaccccagccgtgaagttgaacgtgaatat
gcggtgcgcgtattcggccagattgatgacgaaaaaatcaaactattaagccgtggcgta
caactggaagacgggcctgcggccttccgcaccatcagtttccagggcggtgaaggtttg
aaccaatggtataacgtcactctgaccgaaggacgtaaccgcgaagttcgtcgtttgtgg
gaagcggttggcgtgcaagtcagccggttgatccgcgtacgttacggtgatatcaatctg
ccgaaaggcctgccacgtggcggctggactgagttggatttgaaagcgaccaactacctg
cgtgaattggttgagctggatgtagaaaccgtcagcaaactgccggttgaaaaagatcgt
cgtcgggtgaaagccaaccagattcgtcgtgcggttaaacgtcacaccgaagtggctgga
cgtcagcaaaccgcagggcgtcaaggttcagctcgcaaaggttctacccgccagaatgcc
ggtaacacggcgtcttctggcgctccggtttcaggtcgtcgcagcgcgcccgctaaacgc
ggataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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