KEGG   Zhongshania aliphaticivorans: AZF00_03500
Entry
AZF00_03500       CDS       T04315                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
zal  Zhongshania aliphaticivorans
Pathway
zal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AZF00_03500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zal03019]
    AZF00_03500
   03016 Transfer RNA biogenesis [BR:zal03016]
    AZF00_03500
Enzymes [BR:zal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AZF00_03500
Messenger RNA biogenesis [BR:zal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AZF00_03500
Transfer RNA biogenesis [BR:zal03016]
 Prokaryotic type
  tRNA degradation factors
   AZF00_03500
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 KH_2
Other DBs
NCBI-ProteinID: AMO67421
UniProt: A0A127M2I2
Position
795269..797395
AA seq 708 aa
MNPVTKTFQWGGQTVTLETGRIARQASGAVLVTIDQTQVLCTVVAAKSAKPGQDFFPLSV
HYQERTYAVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPKGFQNEVQVICTVMSAD
KVNDPDIAALIGTSAALAISGAPFAGPVGAARVGFTAEDGYILNPTFEQLKTSMLDMVVA
GTQDAVLMVESEAKQLTEDQMLGGVLYAHQEMQAVIQAIKELAADAGKPSWDWQPEAENT
ALLGAVAEGFKAGLGDAYRITDKMLRYAKVSELRNEAIAALATGENAQYSADDVKGVFAK
LEKQIVRQRILNGEPRIDGRDGRTVRPINVEVGVLGKAHGSALFTRGETQAIGVATLGTS
RDGQFVDALQGEFKDHFLLHYNFPPYSVGECGRMGSTGRREIGHGRLARRSLEAVLPSVE
EFPYTIRVVSEITESNGSSSMASVCVGSLSLMDAGVPLKAPVAGIAMGLVKEGERFAVLT
DILGDEDHLGDMDFKVAGTADGVTALQMDIKIEGITQKIMEVALEQAQQARLLILGQMNQ
ILASSRSDVSDNAPSMHVMKVDSDKIRDIIGKGGATIRAMCEETGAQIDIEDDGTVRVYG
SDAASRDDAVNRILAITAEAEVGAIYTGKVARIVDFGAFVTILPGKDGLVHISQISDERV
ENVSDYLTEGQDVQVKVLDVDARGRIKLSIKEVAAEAATEEQGEPAAE
NT seq 2127 nt   +upstreamnt  +downstreamnt
gtgaatcccgttactaaaacattccagtggggcggccaaactgtcactctggaaaccggt
cgtatagccagacaggctagcggtgcggtattggttactatcgatcaaactcaagttctg
tgtactgtggttgcagcaaaatctgccaagccaggtcaggatttctttccgctatctgtg
cactaccaagagcgcacctacgctgtgggtaaaatccctggtggtttctttaagcgcgaa
gcgcgtccctctgaaaaagagacgctgacgtcacgtttgatcgaccgtccgattcgtcca
ctgtttcccaagggtttccagaacgaagttcaggttatctgtacggtaatgtctgcagac
aaagtaaacgatccagatatcgcagcgctgatcggtacttctgcagcgttggctatttct
ggcgcgccgttcgctggcccagttggtgcagcccgtgttggtttcactgccgaagacggt
tatatccttaacccgacgtttgaacagctgaaaaccagcatgctggacatggttgttgct
ggtactcaagacgccgtattgatggttgagtcagaagctaagcagctgactgaagatcaa
atgctcggtggcgtactttacgctcaccaagaaatgcaagcggttatccaagccattaaa
gagcttgcggcagacgcgggcaaaccttcttgggattggcagccagaagcggaaaatact
gctttactgggcgccgttgccgaaggctttaaagccggtttgggcgatgcctaccgcatt
actgacaaaatgttacgttacgccaaagttagcgaattgcgcaatgaagcgatcgctgca
ttagcaactggtgaaaacgcccagtacagcgccgatgatgtgaaaggtgtttttgccaag
ctggaaaagcaaattgttcgtcagcgtattcttaatggcgagccgcgtatcgatggccgt
gacggccgcactgtacgtccaattaatgttgaagttggcgtattgggcaaagctcacggt
tctgcattgtttactcgcggtgaaactcaggcgattggtgtggcaacattgggcacgtct
cgcgacggccagtttgttgacgcattgcagggcgagtttaaagaccacttcctattgcac
tataacttccctccctactcagtaggcgagtgtggtcgtatgggcagcacaggtcgtcgt
gaaatcggtcacggccggttggcacgtcgcagcttggaagcggtattgccgagcgttgaa
gagttcccgtacaccattcgcgttgtatcagagattactgaatctaacggttcaagctcc
atggcttcggtctgtgttggcagcttgtctttgatggatgccggtgttccgctgaaggcg
cctgttgctggtatcgcgatgggtttggttaaagaaggcgagcgcttcgctgttctgacc
gacatcctgggcgacgaagatcaccttggcgatatggactttaaagttgctggtaccgcc
gacggcgtaacggcgctgcagatggacattaagatcgagggtattacccagaagatcatg
gaagtcgctctggagcaggctcagcaggctcgtttgttgattcttggtcagatgaaccaa
atcttggctagctcgcgcagcgatgtgtcagacaacgcgccaagcatgcacgtgatgaaa
gtcgattctgacaagattcgcgacatcatcggtaaaggcggcgccactattcgcgcaatg
tgcgaagagactggtgcgcagatcgatatcgaagacgacggcactgtccgcgtttacggt
tctgatgctgcctcacgtgacgatgcggttaaccgtattctggcgattactgctgaagct
gaagtcggtgcaatttacaccggtaaagtggcgcgtatcgttgattttggtgcctttgtt
acgattctgccgggtaaagacggtctggtacacatctcacagatttcagatgagcgtgtc
gagaacgttagcgactacctgaccgaaggtcaagacgtacaggttaaagtcctagacgtt
gacgcccgtggccgtatcaagctgtccattaaagaagttgcagcggaagcggcaactgaa
gagcaaggtgagcctgccgctgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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