KEGG   Zhongshania aliphaticivorans: AZF00_17970
Entry
AZF00_17970       CDS       T04315                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
zal  Zhongshania aliphaticivorans
Pathway
zal03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:zal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AZF00_17970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zal03021]
    AZF00_17970
   03400 DNA repair and recombination proteins [BR:zal03400]
    AZF00_17970
Enzymes [BR:zal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AZF00_17970
Transcription machinery [BR:zal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AZF00_17970
DNA repair and recombination proteins [BR:zal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AZF00_17970
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AMO70073
UniProt: A0A127M9Z5
Position
4019789..4020052
AA seq 87 aa
MARITVEDCLQAVDNRFELVMVASKRAHALATGGKTALVAEEGDKPTVIALRELAEGKIT
REQVMAANKHDDEPEIDLGAELGAASL
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcccgaattactgttgaagactgcctacaagccgtcgataatcgctttgaattagtt
atggtcgccagcaaacgcgcccatgctctggcaaccggcggcaaaactgccttagttgca
gaagagggcgataagccaacggttattgcactgcgtgagctggccgaaggcaagatcacc
cgcgagcaagtcatggctgccaataagcacgacgacgagccagaaatcgatctgggcgct
gaattgggcgccgcttcactgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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