KEGG   Zobellella denitrificans: AN401_04525
Entry
AN401_04525       CDS       T05100                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
zdf  Zobellella denitrificans
Pathway
zdf02020  Two-component system
zdf02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:zdf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AN401_04525
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AN401_04525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zdf03021]
    AN401_04525
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:zdf02035]
    AN401_04525
Transcription machinery [BR:zdf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AN401_04525
Bacterial motility proteins [BR:zdf02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AN401_04525
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122 GerE Phage_terminase
Other DBs
NCBI-ProteinID: ATG73212
UniProt: A0A231MY99
Position
956420..957145
AA seq 241 aa
MSGVNKALAYTRQQGSHQLVERHAGLVRRIAQHLLARLPDSVLLDDLVQSGMVGLLEAAR
NFDGSKGASFETFAGIRIRGAMLDEIRRGDWVPRSVHRNGRQIAEAMAAVQRREGRHAQD
REVAAELGVSLEQYHAMLADVSNGRILEIEEFESGIDAQADISQHPAGPFEGMARERFLR
VLADSIKTLPEREALVLSLYYDEELNLKEIGQVLEVSESRVSQIHSQAMLRLKSRLRDWQ
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctggagtaaataaagccctggcctataccaggcagcagggatcccatcaactggtg
gagcgccatgccggcctggtgcgccgcatcgcccagcacctgctggcaagactgccggac
agcgtgctgctggacgatctggtgcaatcgggcatggtggggttgctggaggcggcgcgt
aacttcgacgggtccaagggcgccagtttcgaaaccttcgccggtatccgcatccggggg
gccatgctcgacgagatccgccggggcgactgggtgccccgctcggtacacaggaacggc
cgccagatcgccgaggccatggccgcggtgcagcggcgggaagggcgtcatgcccaggat
cgggaagtggcggcggaactgggggtcagcctggagcagtaccatgccatgctggcggac
gtcagcaacggccggatcctcgagatcgaagagttcgagtcgggtatcgacgcccaggcc
gatatctcccagcatccggccggccccttcgagggcatggcccgggagcgctttctgcgg
gtactggccgacagcatcaagaccctgccggagcgggaagccctggtgctgtccctctac
tacgacgaggaactcaacctcaaggagatcggccaggtgctggaagtgagcgaatcccgg
gtcagccagatccacagccaggcgatgctgcggctgaaatcccggctgcgggattggcaa
aattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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