KEGG   Ziziphus jujuba (Chinese jujube): 107412453
Entry
107412453         CDS       T04794                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107412453
   03009 Ribosome biogenesis [BR:zju03009]
    107412453
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107412453
Spliceosome [BR:zju03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    107412453
Ribosome biogenesis [BR:zju03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    107412453
SSDB
Motif
Pfam: DEAD Helicase_C ARTD15_N AAA_22
Other DBs
NCBI-GeneID: 107412453
NCBI-ProteinID: XP_015875716
UniProt: A0A6P3ZCL6
Position
10:join(27176818..27177135,27177266..27177445,27177570..27177638,27177788..27177894,27178450..27178528,27178982..27179155,27179295..27179443,27179587..27179682,27179798..27179900,27180042..27180104,27180697..27180758,27180904..27181000,27181464..27181582,27181662..27181704,27181914..27182015,27182357..27182455,27182566..27182649,27183229..27183506,27183880..27183895)
AA seq 745 aa
MAPTFVFEPPSDEEVEEIEAEEDEQDIEEEGEEDVEAEGGSKTTRRHSQSPWDFGLYSET
VAEEHARRSTTSVDFKISKAIQERSFPVENPNDDDESSSESEPDRQEDYRPEDDDDEVSN
AGVSKSFFAPSEGASFHANSFMELNLSRPLLRACEALGYTKPTPIQAACIPLAMAGRDIC
GSAITGSGKTAAFTLPTLERLLFRPKRQLAIRVLILTPTRELAVQVHSMIEKLAQFTDIR
CCLIVGGLSTKMQEAALRSMPDIVVATPGRMIDHLRNSLSVALEDLAVLILDEADRLLEL
GFSAEIHELIRLCPKRRQTMLFSATMTEEVNELVKLSLAKPLRLSADPSAKRPATLTEEV
VRIRRMREVNQEAVLLALCSKTFSSKVIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQ
VQRLDALELFRRQEVDYLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGR
EGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIIKWSQTIEQMEDQVAAILQEKSE
ERALRKAEMEVTKAENLIAHRDEIFSRPKRTWFVTEKEKKLAAKAAKASLGKENNSKTEV
ISAQQAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEEENQSGKLEGGGKQKKEKTGM
SLVDLAYRRAKAVKAVKKAADAGKIVRTASKKSNHSSKRTQSRTEEMQELFQSDMSERKQ
KRNSSGTGGKKSKSSFKSKSRYKRR
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggctccgaccttcgtatttgagccgcctagcgatgaagaagtggaagagattgaagcc
gaagaagatgagcaagacatagaagaagaaggagaagaagacgtagaagcagaaggaggg
tcaaaaaccacccgtcgccattctcaatctccatgggacttcggtttgtactccgaaact
gttgccgaagaacatgcccgtcgaagcaccacctctgtggatttcaagatctccaaagct
atccaagaacgctccttccctgttgaaaaccctaacgacgacgatgaaagtagctcagag
tccgaacctgatagacaagaagattataggccggaagatgacgatgatgaggttagcaat
gccggcgtgagtaagtcattcttcgcgccttctgagggagcttctttccatgccaattca
ttcatggaactcaatttgtcacgtcctttacttcgggcttgtgaggctttgggatatacc
aaacctacacctattcaggctgcttgtataccgttggcaatggctgggcgtgatatatgt
gggagtgcaattactggttccgggaagactgccgcatttacattgccgactttggaaaga
ttactgtttcgcccgaaacgtcaattggcgataagagtccttattctgactccaaccaga
gagttggccgtccaggttcacagcatgattgaaaaacttgcccagtttactgatatcaga
tgttgcttgattgttggagggctttcaacaaagatgcaagaagcagccttgagatcgatg
ccagatattgttgtggccactccaggtcgcatgatagaccatttacgcaattctttgtca
gtagctttggaagatcttgcagtactcattcttgatgaagctgatcgtcttttggagctt
gggtttagtgctgaaattcatgaattgattcgtctttgtcccaaacggagacaaacgatg
ctattttcagctacaatgactgaagaagttaatgagcttgtcaagctttctttggcaaaa
cccttgcgcctctctgctgatccatctgcaaaacgaccagctacacttactgaagaggta
gttagaatacgaagaatgcgtgaagtaaaccaggaagcagttcttcttgcattgtgttca
aagactttttcttccaaagtgatcatcttcagtggaacaaagcaggctgcacatagatta
aagattttatttggattagctggttttaaagctgctgagcttcatggcaatctaactcaa
gtccaacgtcttgatgctttggaacttttcaggaggcaggaagttgattatttaattgca
actgatgtggctgcacgtgggctcgacataattggtgttcaaacagttataaactttgca
tgtccacgtgatcttacgagctatgttcatcgagtgggtcgtacagcaagggctggtaga
gaaggttatgctgtcacctttgtgacagataatgatcgatctcttttaaaagctattgca
aaaagagctggttcaaagctaaagagccgaattgttgctgagcaatcaataattaagtgg
tctcagacaattgaacaaatggaagatcaagtggctgcaattcttcaagaaaagagcgaa
gagagagcactaagaaaagctgagatggaagtaacaaaggcagaaaatttgattgcccac
agggatgaaattttttcacgtcccaaaaggacatggtttgtgacagaaaaggagaaaaaa
cttgcagcaaaggcagctaaggcatctctgggaaaagaaaataactctaaaactgaggta
atcagtgcacaacaagctgaagacctcaaaatgaaggaaaagaggaagagagagcgtgag
aaaaatttgccccgaaagaaacgcagaaaattggaagcagctagagaaatgctggaggaa
gaaaatcaaagtggaaaattggaaggtggcggaaagcaaaagaaggaaaagactggaatg
tctcttgttgacctggcttacagacgggccaaagccgtgaaggctgtaaagaaggcagca
gatgctggcaagattgtgaggacagccagcaagaaatccaatcattcctccaaaagaact
caatcaaggacagaagaaatgcaggaattgttccagagtgatatgagcgagaggaagcag
aaaagaaacagcagtggcacaggagggaagaagtctaagagttcctttaagagcaaatct
aggtataagcgcaggtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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