KEGG T04794: 107413916

Ziziphus jujuba (Chinese jujube): 107413916

Entry

107413916         CDS       T04794

Name

(RefSeq) putative pentatricopeptide repeat-containing protein At2g02150 isoform X1

K17710

pentatricopeptide repeat domain-containing protein 1

Organism

zju Ziziphus jujuba (Chinese jujube)

Brite

KEGG Orthology (KO) [BR:zju00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:zju03016]
    107413916
   03029 Mitochondrial biogenesis [BR:zju03029]
    107413916
Transfer RNA biogenesis [BR:zju03016]
Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    107413916
Mitochondrial biogenesis [BR:zju03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    107413916

SSDB

Motif

Pfam:

PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27 Clathrin AEP1

Other DBs

NCBI-GeneID:

107413916

NCBI-ProteinID:

XP_015877459

UniProt:

A0A6P3ZG37

Position

1:complement(6938179..6940554)

AA seq 791 aa
MIPTDATFFSFFLLFIAKMLLSLRNFLHMGRRASISVSPFYPIPHSVPSSYLYYTLVFTV
SSSSSSSLGSSIACPLVWFTGFLCIIRRPFVTKSNPNSFLEDVDKHYLRRIIQHDRWDDP
KIVNLLDSAIAPTWVSKFLVELKGDPLLALKLFRWAGTRMGFRHTTESYCVLVHILFYAG
MYHNAHEILKELVLLRPVFPGCDIFDLLWSTRNVCVPGFGVFDALFSVLIELGMFEEASQ
VFMKMKRFRVFPKVHSCNALLHSLSMSGKSDFSRKFFKDMVGAGIKLNVFSYNIMIDYMC
KEGDVETARNLFTQMKRAGLMPDVVTYNSLIDGYGKVGKLDESVYTFEEMKEAGCEPDII
TFNSLINCFCKFQKLPQALEFLHEMKNNGLKANVVTYSSLIDAFCKEGMKQVALKFFVDM
RRLGHLPNEYTYTSLIDANCKAGNLTDALKLIKEMLQEGINLNIVTYTVLLDGLCEDGKI
KEAEEVFMAMQKAGVTSNQKIYTAFVHGYIKAKKMDNAFELLEEMKEKNIEADLLLYGTI
IWGLCGQNKLEESELVISELKSCGIPPNQVIYTTLIDAYFKAGKTKEALALWQEMHECGI
EVNVVTYCALINGLCKQGLVQEATNYFDRMADFGLQPNVAVYTALMDGFCKNNCIGTAKK
LFDEMLDKGISPDKAAYTTLIDGNLKQGNLQEALDFLDRMNEMGMELDLHVYTSLIWGFS
QFGKVQQAKIWLDEMIGKGIVPDEILCVCLLRNYYEYGNAVEATSLQNELIKRGLIDGSS
NYVVSDVRTQG

NT seq 2376 nt +upstreamnt +downstreamnt
atgattccgactgatgctactttcttctccttcttcctcctcttcattgcaaagatgctg
ctttctctgcgcaacttcttgcacatgggtcgcagagcttctatcagtgtaagccccttc
tatccaatcccacattccgttccttcttcttatttgtattataccttagtttttactgtt
tcctcttcatcctcatcatctcttggttcttctatagcttgccctttggtttggttcacg
ggttttctctgtatcattcgtcgtccctttgtcacaaaatcgaatcccaattcttttctt
gaagatgtagataaacattacttacgtagaatcattcagcatgaccgttgggacgatccc
aagattgttaatttgttggattctgctattgcgccgacttgggtttccaagtttttggta
gaattaaaaggggatcctttattggctctgaaattgttcagatgggctggaactcgaatg
gggttccgccacactactgagtcatattgtgtattggttcacatactcttttatgctgga
atgtaccataatgcacatgaaatccttaaagaattggttttgttgaggcctgtgtttccg
ggttgtgatatatttgatttgttgtggtcgactaggaatgtatgtgttcctggttttgga
gtttttgatgctttatttagtgtattgattgagctggggatgtttgaggaagctagtcag
gtttttatgaagatgaaaaggtttagggtttttccgaaagtgcactcatgtaatgcactt
ctgcatagtctttctatgtcaggaaagagtgacttctcaaggaagtttttcaaggacatg
gttggggctggtatcaaacttaatgttttctcgtataacataatgattgattatatgtgc
aaagaaggggatgtggaaacagctaggaacttgtttacacaaatgaagcgggcaggcctt
atgcctgatgttgtgacctataattctcttattgatggatatggaaaggttgggaaatta
gatgaatctgtttacacatttgaagaaatgaaagaagcaggttgtgagcctgatataata
accttcaattctttgatcaattgtttttgtaaatttcaaaaattgcctcaagctttggag
tttctccatgagatgaagaataatggattgaaagccaatgttgtgacgtacagctcatta
attgatgccttttgtaaagaagggatgaagcaagtggcacttaaattttttgtggacatg
agacgactagggcatttacctaatgaatacacttatacttctttgattgatgcaaattgt
aaagcaggtaatctaactgatgcgttaaagctgataaaggagatgttacaggaaggaatt
aacttgaacattgtaacatatacggttttattggatggcctttgtgaagatgggaaaata
aaggaagcagaagaagtctttatggcaatgcagaaagctggagtgacttcaaaccagaag
atttacactgcttttgttcatgggtatattaaggccaagaagatggataatgcttttgaa
cttttggaagaaatgaaggagaaaaacattgaagcagatttgttgctctatggaaccatc
atttggggtttgtgcggccaaaataagcttgaagaatctgagcttgtaatcagcgaactg
aagtcttgtggtatacctcctaatcaagtcatatatactactcttattgatgcctacttc
aaggcaggaaaaactaaggaggcacttgctctttggcaagaaatgcatgaatgtggtatt
gaagtcaatgttgtaacttattgtgcattaattaatggtttatgcaaacagggattggtc
caggaagcgactaattattttgataggatggctgactttggcttgcaacctaatgttgca
gtctatacagccctaatggatggcttttgtaagaataattgcattggcacagctaaaaag
ctgtttgacgaaatgctagataagggtattagtccagataaagccgcatacaccacccta
attgatgggaacttaaagcaaggtaatctgcaagaagctctggacttccttgacagaatg
aatgaaatgggtatggagcttgatcttcatgtgtatacttccttgatctggggattttct
cagtttggtaaggtgcaacaagcaaaaatttggcttgatgaaatgattgggaaaggtatc
gttcctgacgagatcctatgtgtttgtctattaagaaactactatgagtatgggaatgcg
gttgaagccacttcgttacaaaatgagttgataaaaaggggtctaatagatgggtcatct
aattatgtagtctctgatgtaagaactcaaggatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (51)   

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