KEGG   Ziziphus jujuba (Chinese jujube): 107414436
Entry
107414436         CDS       T04794                                 
Name
(RefSeq) WD repeat-containing protein RUP2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju04120  Ubiquitin mediated proteolysis
zju04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107414436
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    107414436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zju04121]
    107414436
Enzymes [BR:zju01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107414436
Ubiquitin system [BR:zju04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107414436
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107414436
SSDB
Motif
Pfam: WD40 YNR034W-A-like WD40_like Tho2
Other DBs
NCBI-GeneID: 107414436
NCBI-ProteinID: XP_015878032
UniProt: A0A6P3ZRI5
Position
8:25491075..25492349
AA seq 424 aa
MGAFHWPKTTKSSNNSIYEWEMKNLLTKFHLPDAQEDQNPETKGKEKENTNDEDKQLELV
EEKLKEQQQEHERARSEWDFKLSAVVSTSSSAFAAAAISDALGVIEFDQSEKLIATGGIA
RKIRIYRLQSLLSNNEGGDDVARLEHANACDYYMTTPAKLSSLRWRPGSDGRILGSGDYD
GVVMEYDLERRVPVFERDEHGGRRVWSVDYSHWGPVVAASGSDDGTMQMWDPRCDGGKSM
AAVQPSGARSSVCCVEFNPFGGPLVAVGCADRKAYGYDVRRLVDPVLVLDGHDKTVSYVR
FFDGSKIVSAGTDGCLKLWNTDDSSVIRTYKGHTNRRSFVGLSVWRNGGLLGCGSENNQV
FVYDTRWGQPIWVHEFGTVARACCDGGFVSCLCWRQVEVDQCTLVAGGSNGVLQVFVGRR
KSFQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgggagcctttcattggcccaaaaccacaaaatcttccaacaacagcatctatgaatgg
gaaatgaaaaatctccttacgaaatttcatcttccagatgcccaagaagaccaaaaccca
gaaacgaaaggaaaagaaaaagaaaataccaatgatgaagataaacaacttgaattagta
gaggaaaaacttaaagaacaacaacaagaacatgaaagagctaggagcgaatgggatttc
aagctctccgccgtcgtttccacaagttcctccgccttcgccgccgcagccatatcggat
gctctcggcgtcatcgaattcgaccagtcggagaaactcatagcaacgggaggaatcgcg
aggaaaataaggatttacagattgcagtccttgttatcgaataatgaaggaggtgatgac
gtggctcgtcttgagcatgccaatgcatgcgactactacatgaccactccggccaagctt
agcagcctcagatggagacccggatccgacgggcggatcttggggtccggagattacgac
ggggtcgtgatggagtacgatctcgaaaggcgggttccggttttcgagcgcgacgagcac
ggtggtcgtcgggtttggagcgtggactactcgcattggggtccggttgtggcggcttcc
gggtcggacgatgggaccatgcaaatgtgggacccacgctgtgacggtgggaaatctatg
gcggcggtgcagcctagtggagctcgaagttccgtttgttgcgtggagttcaacccattc
ggtggccctttggtagccgtaggatgcgcggatcgaaaagcctacggctacgacgtaagg
aggttagtggacccggttttagtcctagacgggcatgacaaaacggtgtcgtacgtgagg
ttcttcgacgggagtaaaatagtgtcagccggaaccgacgggtgcttaaagctttggaat
acggacgattcgagcgtgattcgcacgtacaaagggcacacgaaccgtcggagcttcgtc
ggactatccgtttggaggaatggcgggttgttgggttgcgggtcggaaaacaaccaggtg
ttcgtgtatgatacaaggtggggtcagcccatttgggtgcatgaattcggaacagtggcc
cgagcctgttgcgatggtgggttcgtgagctgcttgtgttggaggcaagttgaagtggac
cagtgtacactagtggcaggtggatcgaatggggttttgcaggtttttgtgggcagaaga
aaatcatttcaataa

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