KEGG   Ziziphus jujuba (Chinese jujube): 107415942
Entry
107415942         CDS       T04794                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju04120  Ubiquitin mediated proteolysis
zju04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107415942
   04120 Ubiquitin mediated proteolysis
    107415942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zju04121]
    107415942
Enzymes [BR:zju01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107415942
Ubiquitin system [BR:zju04121]
 Ubiquitin ligases (E3)
  U-box type E3
   107415942
SSDB
Motif
Pfam: Ufd2P_core U-box DUF5770
Other DBs
NCBI-GeneID: 107415942
NCBI-ProteinID: XP_015879864
UniProt: A0A6P3ZLG9
Position
4:join(29549236..29550080,29550727..29550931,29551168..29551319,29551420..29551711,29551981..29552133,29552294..29552497,29552605..29552717,29552824..29552938,29553199..29553288,29553391..29553594,29553673..29553768,29553905..29554027,29554424..29554516,29554686..29554850,29555028..29555117,29555208..29555384)
AA seq 1038 aa
MATPKPQRSLEEVEDIILRKIFLVSLTDSSDSDSRIVYLEMAAAEILSEGKQLRLSRDLM
ERVLIDRLSGIFPSVEPPFQYLIGCYRRAHDEGKKIASMKDKNIKSEMESVVGQAKKLTV
SYCRIHLGNPEVFPSGNSGLGSNKPDASPLLPLIFSKVGSAVVDGFGGSSSGVQCPPGFL
EEFFKDSDFDSLDPILKGLYENLRKSVINVSALGNFQQPLRALLFLVSFPVGAKSLVNHA
WWIPKGVYLNGRVMEMTSILGPFFHVSALPDHALFKSHPDVGEQCFSEASNRRPADLLSS
FTTIKTVMNNLYDGLAEVLLSLLKNTETRQRVLEYLAEVINKNSSRAHIQVDPLSSASSG
MFVNLSAVMLRLCEPFLDANLTKKDKIDPKYVFYGDRLELRELTALHASSEEVAEWINKD
RLGQTNSSKQNGRDDNRFLQSQEATSSGSNISGPSKTHSTSSGEKSKYTFICECFFMTAR
ILNLGLLKAFSDFKHLVQDITRSEDTLNTLKDMQEQAPSPQMAQDIKRLEKELEVYSQEK
LCYEAQILRDGTLIQRALSFYRLLVVWLVGMVGGFKMPLPSTCPMEFACMPEHFVEDAME
LIIFASRIPKALDGVPLDDFMNFIIMFMASPNYIRNPYLRSKMVEVLNCWMPRRSGSSAT
ASLFEGHQLSLEYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNA
WRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWERRPAQERQ
ERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVG
PQRKSLSLKEPEKYEFRPKQLLKQIVYIYVHLARGDTENIFPAAISKDGRSYNEQLFNAA
ADVLRRIGENGRVIQEFIELGAKAKVAAAEAMDAEAALGEIPDEFLDPIQYTLMKDPVIL
PSSRITVDRPVIQRHLLSDSTDPFNRSHLTVDMLIPDTELKARIEEFVRSQESKKREGLS
IQSTKATIQPTVSEMLID
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggcgaccccaaaaccccaaaggtctctggaagaggtggaagatataatactcaggaag
atatttttggtatcgctcaccgattcctctgactcggattcccgaatcgtttacttggaa
atggctgcggctgagattctcagcgaaggtaagcaattgaggctttcccgggatttgatg
gaaagggttctaattgatcggctttccgggattttcccatctgtcgaacccccatttcaa
tacctgattggctgttaccgacgagcccacgatgagggcaagaaaattgcttccatgaag
gataagaacatcaagtctgagatggaatctgtggtcgggcaggcgaagaagctcaccgtt
tcgtattgtagaatccatttgggtaacccggaagtgtttccgagtggcaattcgggtttg
ggttcgaacaaacccgatgcttcgccgctgttgccgttgattttctcgaaggttgggagc
gcggtggtggatggttttggaggtagtagtagtggcgttcagtgcccacctgggttcttg
gaggaatttttcaaagactccgactttgatagcttggacccaatattgaaaggattgtat
gagaaccttaggaagagcgtgattaatgtttcggctctcgggaactttcagcagccactg
agggccctgctttttttggttagtttcccagttggtgctaagtctctggtgaatcatgct
tggtggattcctaaaggagtgtatttgaatgggcgtgttatggagatgacgagcattttg
ggtcctttctttcatgttagtgctctgcctgatcatgctcttttcaagagccatcccgac
gtgggggagcagtgcttttcagaagcttcaaaccgtcgaccagctgatctgttatcgtca
tttactacaattaagacagtgatgaataatttatatgatggcctagctgaggttcttctc
tcactccttaaaaatacagaaacccgtcagcgtgtacttgagtatcttgcggaggttatt
aataaaaattcatcaagggcacatatacaggtggatcctttatctagtgcaagttcaggc
atgtttgtcaatctcagtgctgtcatgcttcggctttgtgaaccatttttagatgcaaac
ttaacaaaaaaggataaaattgatccaaaatatgtattttatggtgaccgtttggaatta
agagagttgactgctctacatgcatcatcggaagaagtagctgagtggattaacaaagat
agactgggccaaactaatagctctaaacagaatggtcgtgatgataatcgctttttacaa
tctcaagaagccaccagttccggcagtaatatttctggaccttcaaaaacacattcaaca
tcaagtggtgaaaagagcaagtatacatttatatgtgaatgcttcttcatgactgcaagg
attctcaatctgggcttgttgaaagcattttccgactttaaacatttggttcaggacatc
acaagaagtgaagatactctcaacactcttaaagacatgcaagagcaggcaccttctcca
caaatggcgcaggatataaaacgtcttgagaaagaactagaggtgtattcccaggaaaag
ctttgttatgaagctcagatactaagggatgggacacttatacagcgagccctttctttc
taccggttattggttgtatggttggttggcatggttggtggatttaaaatgcctctacca
tcaacttgtcctatggaatttgcatgtatgcctgagcactttgtggaagatgccatggaa
ctgattatatttgcttctcggattccaaaagctttagatggtgtcccgctggatgatttt
atgaactttattatcatgttcatggccagtccaaactatatcagaaacccatatctaagg
tcaaagatggttgaagtcctgaactgctggatgccccgtagaagtggttcatctgctact
gctagtctatttgaaggccaccaactgtctcttgagtatcttgtgaaaaaccttttgaag
ctctatgttgacattgagttcactggttctcatactcagttctatgataagtttaacatc
cgtcataatattgccgaacttcttgagtacctttggcaagtccctagccatcgtaatgct
tggagacagattgctaaggaagaggagaagggcgtctatctgaatttcttaaacttctta
ataaatgatagcatctatcttcttgatgaaagtcttaacaaaattcttgaactcaaagag
cttgaagctgagatgtcaaatactacagaatgggagcgaagacctgctcaagagaggcag
gagagaactcggctattccattctcaagagaatattatccgtatcgacatgaagctggca
aatgaagatgtgagtatgctggcatttacttctgaacagattacggctcctttcctgctg
cctgagatggtcgaaagggtggccagcatgctcaattattttctgttgcaacttgttggt
cctcaaaggaaatcccttagtttgaaagagccagaaaaatatgaattccgtccaaagcag
ttacttaagcagattgtttacatatatgttcatttggcaaggggtgatacggaaaatatt
ttcccagctgccatctcaaaggatggtcggtcatataatgaacagttgtttaatgctgca
gctgatgtcctacggagaattggtgaaaatggaagggttatacaggaatttatcgagctg
ggtgccaaagccaaagttgcagctgcagaggccatggatgctgaagctgctcttggggag
ataccagatgaattccttgatccaatccaatacactttaatgaaagatcctgtgatctta
ccttcttcaagaatcacagtagaccggccagtgattcaaaggcatcttcttagtgatagt
actgatcctttcaaccgttcccatctcactgtggacatgctgataccagacactgaattg
aaagcaagaattgaggagttcgtcaggtcccaagaatcaaagaagagggaaggcctaagc
atccagagcaccaaggcaacaatacaacccacagttagtgaaatgctaattgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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