KEGG   Ziziphus jujuba (Chinese jujube): 107417066
Entry
107417066         CDS       T04794                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107417066
  09122 Translation
   03013 Nucleocytoplasmic transport
    107417066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107417066
   03041 Spliceosome [BR:zju03041]
    107417066
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107417066
Spliceosome [BR:zju03041]
 Complex C
  Other components
   EJC/TREX
    107417066
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107417066
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Nup160 CNH PROPPIN
Other DBs
NCBI-GeneID: 107417066
NCBI-ProteinID: XP_015881111
UniProt: A0A6P3ZP58
Position
1:complement(join(11723526..11723563,11723647..11723779,11723988..11724066,11724165..11724251,11724398..11724497,11724574..11724631,11724922..11724990,11725170..11725261,11725697..11725826,11726260..11726355,11726496..11726558))
AA seq 314 aa
MEETIPFKNLQSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIETHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGI
HIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGDKFFLTTGNGTVEVLAYPSL
RPLDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF
NHTGDYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIFGFDSAA
NT seq 945 nt   +upstreamnt  +downstreamnt
atggaggagacaattccctttaagaatttgcaaagcagagagtatcaaggtcacaagaaa
aaggtgcattcggtggcttggaattgcacgggcacgaagcttgcttccggttctgtggat
caaactgcaagagtttggcatatcgagacccatggacatggcaaggttaaagatattgaa
ttgaagggacacactgatagtgtggatcagctgtgttgggatcctaagcatgctgatcta
attgcaactgcttcaggagacaagactgtccgtctatgggatgcacgaagtggaaaatgc
actcagcaggcagaacttagtggagagaacattaacatcacctataaacctgatgggatt
cacatagctgttggtaatagggatgatgaactaacaattttagatgttcggaaattcaag
ccaattcataagcgcaagttcaattatgaggtaaatgagattgcttggaacatgacaggc
gacaagttctttttgacaactggaaatggtactgttgaagttctagcatacccatctctt
cgaccacttgacactcttatggctcatacagctggttgctattgcattgcaattgaccca
attgggagatattttgcagttggaagtgctgattccttagtcagcctgtgggacatttca
gagatgctctgtgtaagaacatttacaaaacttgaatggcctgtccggacgataagcttc
aaccatactggagattatatagcttcagccagtgaggacttattcattgacatagcaaat
gttcaaactggacggacagtgcatcaaattccctgccgcgctgccatgaacagcgttgaa
tggaatcccaaatataatctgcttgcatatgctggagatgacaagaacaagtatcaggct
gatgaaggtgtctttcgaatatttggctttgatagtgccgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system