KEGG   Ziziphus jujuba (Chinese jujube): 107421211
Entry
107421211         CDS       T04794                                 
Name
(RefSeq) RNA-dependent RNA polymerase 6
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107421211
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     107421211
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     107421211
SSDB
Motif
Pfam: RdRP LPD39 ZnuA
Other DBs
NCBI-GeneID: 107421211
NCBI-ProteinID: XP_015885881
UniProt: A0A6P4AJG8
Position
5:complement(join(16489616..16490491,16491073..16493790))
AA seq 1197 aa
MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI
DTAAIERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLN
QRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAFS
FKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDSV
PYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISIPPRHGAKLKKAISYLRERRVHHDSLRW
PLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRNQ
MKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITPT
RAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNSF
PQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSVWFFAEDKNINVFEVKSWMGR
FTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALEV
AQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSWT
RFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGNV
AAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ
CFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDLH
HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLT
RPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPKT
GKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLPSD
IPYDIDLEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSRK
QGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEWVK
KSLDLQEPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM
NT seq 3594 nt   +upstreamnt  +downstreamnt
atgggatctaaggaaaatgaaaaacagatggtggtaactcaagttagtcttggtggattt
gaccgtcatgtcagagcaaaggatctttcggacttcttggaagatgaaattgggcttgtt
tacaggtgtagattgaaaacttcttcgacacctccagagtcctatccagattataccatt
gatactgcagctatcgagagaaaagatgattataaaaaagtggagccccatgcttttgtg
cattttgccttggctgaatcagcaaaatggattctagatgctgcaggtcgttgtgagctt
attctgaatgatcgaccattgaaggtaagtttggggccagagaatccatatcgcttgaac
caaaggaggagaaccactactccaattaagttgtctgatgtggttgttgatattggaact
ttagtaacccgagatcagttctttattgcttggagaggacctccttatggggttgatttt
cttgtcgatccttttgatgggacatgcaagttttgtttcacaagggatactgctttctca
tttaaaggttcactcaatcatgcagtaataaaatgtgatttcaaaatggaattcctggtc
agagacatcaatgagttcaaacaatatacagatacatcatatctagtccttttgttgcag
ctgaattcagcgccccgcatttggtatagaactgctgatgatgatattgatgattcagtt
ccatatgatatgttggatgatgatgatccttggatccgaacaacagattttactcctagt
ggggccattgggcgtagcaattcatacaggatttcaatcccacctcgccatggtgcaaag
ttaaagaaggccataagttatcttcgagaaagacgggtccatcatgacagcctcagatgg
ccacttaggatccagaaagaacctgatttcgatatgcccatgtcagatcctttcttctgt
attcattataaagaagatattgactttgagacgatgttccttgtgaatgctgtgatacac
aagggtatatttaatcagcaccagatttctgatggtttctttaatttattgagaaaccag
atgaaggaggtcaatgtggctgcactaaagcacatatcttcctacaagcgcccagttttt
gatgcctgtaggaggttgaaagttgtacaagaatggttgctaagggatccaaagcttttc
aagaaacctaaacggttggatgatattgctgaagttcgtcggttagtaattaccccaact
agagcctattgtcttccaccagaagttgaactctccaatagggttcttaggaactataaa
gaagtggctgatcggtttttaagggttacctttatggatgaaggcatgcagacgataaat
tcaaatgttcttacctatcatgtagcttctattgtaagggaaatcacatcaaactccttt
cctcagaaaaccaaagtattccaaaggattaagagcattctgaccaatggattttactta
tgtggtcggaaatactcttttttggcattctcttccaatcagttgagggaccgctctgtc
tggttttttgctgaagacaagaacataaatgtcttcgaagttaaaagttggatggggagg
ttcaccaacagaaatgttgcaaagtgtgctgctaggatgggtctgtgcttttcgtccaca
tatgcttctgtagaagttccatcaacgcaggtcaatcgtggatttcctgatattaagaga
aatggatacactttctctgatgggattggtaagattactcctgatcttgcactggaagtt
gcacagaaattgaagctggaaagaaatccaccatgcgcttatcagattagatatgctggc
tttaaaggggtcgttgcttgctggaaaccaacggatgatgatggggctcgactttctttg
aggcctagcatggacaagtttcagtccaatcacactattttggaaatttgttcttggact
aggtttcagcctggtttcctaaacaggcagattgtcaccttgctgtcagcattgaatgtt
tcagatgagatattctggaacatgcaggaaactatgattttcaaattaaaccagatgctt
atagacacagacatagcttttgatgttctcacagcatcttgtgctgagcaaggaaatgtg
gcagcaataatgttgagtgcaggtttcagcccccaaaaagaacctcatctacgaggcatg
ttaacctgcatacgagctgcacagctttggggcctacgggaaaaggctaggatttttgtt
ccttctgggagatggctcatgggctgtctagatgagctaggggtacttgaacaaggtcag
tgctttatccaagtgtctaacccgtcgcttgaaaattgtttctcaaagcatggttctagg
tttaatgagagaaatgataatcttgaagtcatcaagggttttgtggtgatagcaaagaat
ccttgtctacacccaggagatgtaaggattttggaggcagtagatgtccctgacttgcac
catttatatgattgccttgttttccctcaaaagggtgaaaggcctcatacaaatgaagct
tctggaagtgaccttgatggtgacctctactttgtcacatgggatgaaaatcttattcct
cctagtaagaagagctggataccgatgcagtatgatgctgctgaaaccaaacaattgaca
cgtccagtcactcaagaggacataatagaatttttctccaaaaacatggtaaatgagaac
cttgggaccatctgcaatgcccatgtggttcacgctgatctcagcgagcatggggcattg
gatgagaagtgcctaaaactagcagacttggcagctacagcagttgattttccgaaaact
ggtaaaattgttaccatgccttttaatcttaaacccaagctatacccagattttatggga
aaagatgagtaccagtcctacaagtcaaataaaattttgggaaaactctatcggaagatt
aaagatgcttatgatgaagatgtgacagcatcttctgagataaattttcttcctagtgat
atcccttacgatatagatcttgaggtatcaggagcatctgatttcatcgttgatgcatgg
gagcaaaagtgctcttatgatgggcagctgaatggtttactgggacaatacaaagtaaac
agagaagaagaggttgtaactgggcacatttggtccatgccaaagtacagcagcaggaag
caaggggaacttaaggagaggctgaagcactcttacagtgccctgaaaaaggaatttagg
caaatttttgagaagatggaagaaaagtttgaggaactctctgatgatgagaaaaatatt
atttatgagcagaaggcatcggcatggtaccaggtcacttaccatcctgaatgggtgaag
aaatcattggacttgcaagaaccagatggttctaggtatgcggtgatgttaagtttcgca
tggattgcagctgattaccttacacggatcaagattaggtgccgtggagttggaaatgtt
gactgtgataagccaatcaacgctctggggaagtatctttctgatcggatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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