KEGG   Ziziphus jujuba (Chinese jujube): 107423349
Entry
107423349         CDS       T04794                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107423349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107423349
   03032 DNA replication proteins [BR:zju03032]
    107423349
Spliceosome [BR:zju03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107423349
  U2 snRNP components
    107423349
 Complex B
  U1 snRNP components
    107423349
  U4/U6.U5 tri-snRNP components
    107423349
 Complex C
  U2 snRNP components
    107423349
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107423349
SSDB
Motif
Pfam: LSM Gemin7
Other DBs
NCBI-GeneID: 107423349
NCBI-ProteinID: XP_015888378
UniProt: A0A6P4A4S7
Position
3:complement(join(27699773..27699816,27699957..27700148,27702480..27702556,27702702..27702715))
AA seq 108 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPVGRGRGRGRGR
NT seq 327 nt   +upstreamnt  +downstreamnt
atgaagctcgtcaggtttttgatgaagttgaacaacgagactgtgtcgattgaactcaaa
aacggcaccgttgtacatggaactataacaggcgtggacatcagtatgaacacacatctg
aagacggttaaacttacactgaaggggaaaaatccagtgactcttgatcatctcagtgtt
agggggaacaacattcgctactacatcctccctgacagcttgaatcttgagactctactg
gtggaagagacacccagggtcaagcccaagaagccaactgctgggaggcctgtgggacgg
ggtcgaggacgtggccgtggccgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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