KEGG   Ziziphus jujuba (Chinese jujube): 107428259
Entry
107428259         CDS       T04794                                 
Name
(RefSeq) nuclear pore complex protein NUP54
  KO
K14308  nuclear pore complex protein Nup54
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107428259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107428259
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107428259
SSDB
Motif
Pfam: Nup54
Other DBs
NCBI-GeneID: 107428259
NCBI-ProteinID: XP_015894251
UniProt: A0A6P4AFL4
Position
12:complement(join(2604742..2604750,2604838..2604945,2605160..2605309,2605400..2605501,2605929..2606015,2606095..2606160,2606555..2606665,2606837..2606896,2607014..2607067,2607158..2607622))
AA seq 403 aa
MFGAQPSPSAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGAPS
STPAFGTPSTPSFATGGFGSSLFSSPFTSQTQQQQMPQLFQQPAGTGGGLGFQTPFATPT
PTPPPQSIPFPGSQLTTQMAPVAPIPFSLADRDIQAIVDAYKEDPGNPKYAFKHLLFSVT
DPQYRVKPAGVSDIMWAEAMGKLEGMESTDRERLWPQLVRGFKDLSQRLKLQDEVILSDA
ERLRITQSNVKMLQRHFQADTLPRIERMRQKEQGLQRRLLRMMRIVEALEGKGYRLPLMK
GEAELAEKLAAITRQLKGSGAELSRRVQSLLTISRVQANSLGGDGSVYLPGSTKIDEQSL
ADMQEVLQQQTGAIARLGNVLKRDSRDMEIIMAEDTEMNGDSF
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgttcggagctcaaccatcgccgtctgcctttggcactccgtcatcgacgccggcgttc
ggcactccgtcgtcgactccggcatttggcactccgtcatcgaccccagccttcggcact
ccatcatcaaccccagcgttcggaactccatcttcaactccagcattcggagcgccatct
tcgactccggctttcgggactccatcaacgccttcattcgccactggcggatttggttcc
tccttattctcgagtccgttcacttcccaaactcaacaacagcagatgccgcagttgttt
cagcagccggcgggaactggcggtggtttaggttttcagactccatttgctactcctact
cctactcctcctcctcagtccattccatttcctggttcacaactgaccactcagatggct
ccggtggctccaatccctttctctctcgcggatcgtgatattcaagcaattgttgatgct
tacaaggaagatcctggaaaccctaaatatgcttttaagcatttactattcagtgttact
gatcctcaatatagggtgaaacctgctggtgtatcggatataatgtgggcagaggctatg
gggaagcttgaaggcatggaaagtactgaccgggaacgactatggcctcagcttgttcgt
ggtttcaaagatctttctcaacggctgaagctccaagatgaagtcattctatcagatgca
gagaggttgagaattactcaaagcaatgtgaaaatgcttcaaaggcattttcaagctgac
actcttcctcggattgaaagaatgagacagaaagagcaaggtcttcagaggcgtctttta
cggatgatgagaatagtggaggcactggaaggtaagggttacagattacccttaatgaaa
ggggaagctgagttagctgaaaagttagctgcaatcactagacagttaaaaggatctgga
gcagagctttcaaggagggtacaaagcctgctcactatttctcgtgttcaagcaaattca
ttaggtggcgatggctctgtatatcttcctggatcaacaaaaatagatgaacaaagtctt
gctgatatgcaagaggtcttacaacagcagacaggggccattgcaagacttggcaatgtt
ttgaagcgagatagcagggacatggagattataatggctgaggacacagaaatgaatgga
gatagtttctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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