KEGG   Ziziphus jujuba (Chinese jujube): 107428281
Entry
107428281         CDS       T04794                                 
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X2
  KO
K14439  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107428281
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    107428281
SSDB
Motif
Pfam: SNF2-rel_dom ResIII DEAD Helicase_C SWI2_SNF2 Oest_recep
Other DBs
NCBI-GeneID: 107428281
NCBI-ProteinID: XP_015894276
UniProt: A0A6P4B6K3
Position
12:complement(join(3460654..3460663,3460836..3460972,3461092..3461169,3461441..3461599,3461714..3461887,3462018..3462203,3462882..3463062,3463143..3463393,3463495..3463535,3464291..3464408,3465378..3465914))
AA seq 623 aa
MKRVFEEISDDEWENHSFKPSRILNNKSSQNPSLPQPPPIESFAFRSSSSSARIEISDQS
SDDCVEIKEDLEDDDANVELVRPPANRGRRFVIDDDESEGEFDEVVALKSTTEDEEEEEE
EEEEEDEEEEVDEEDVVGKALQKCAKISAELKKELYGSGVSACDRYAEVENSSVRIVTQD
DINAACRSEDSDFQPILKPYQLVGVNFLLLLYRKGIGGAILADEMGLGKTIQAITYLTLL
KHLNNNPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAARSAYSKELSSLAKAGLPP
PFNVLLVCYSLFERHSAQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAQNA
NQRLMLTGTPLQNDLHELWSLLEFMMPDLFCTEDVDLKKLLNAEDRELIGRMKSILGPFI
LRRLKSDVMQQLVPKIQQVEYVVMEKQQDDTYRESIEEYRAASRARMAKSSDVNSNNIFK
VLPRRQISNYFVQFRKIANHPLLVRRIYSDEDVVRFAKKLYPMGVFGFECTLDKVIEELK
SYNDFSIHRVLLYYNVSDAKGSLSDKYVMLSAKCQALAELLPSLKQDGHRVLIFSQWTSM
LDILEWTLDVIGVTYRRLDGRRL
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgaagcgtgtcttcgaagaaatctccgacgacgagtgggaaaaccactcctttaagccc
tctcgaattctcaacaacaagtcctcccaaaaccctagccttcctcaacctcctcctatc
gagtcctttgctttccggtcgtcgtcgtcgtcggcgaggattgaaatctccgatcaaagt
agcgacgattgcgtcgagattaaggaggatttggaggacgacgatgccaacgtcgagctg
gttaggcctccggcaaatcgtggccgtcggttcgtgatcgatgatgatgagagtgaggga
gagttcgatgaagtggtggcgttgaagtccacgactgaggatgaggaagaagaagaagaa
gaagaagaagaagaagatgaagaagaagaggtggatgaggaagatgttgtagggaaggct
ttacagaagtgcgcgaagatttcggccgagctgaaaaaggagctatatggttctggagtg
tcggcttgtgatcgttatgcggaagtagaaaattcttctgtgaggattgtcactcaggat
gatattaatgcggcatgtagatcagaggattcagattttcagcctattctcaagccatac
cagttggttggtgtgaactttcttcttctattgtatcggaagggtattggaggagccata
ttggccgatgagatgggccttgggaagactattcaggctataacttatctgaccttattg
aagcatttaaacaataatcctggtccgcatttgattgtatgtcctgcttctgttttggaa
aactgggaaagagaacttaaaaagtggtgtccatcattttctgttctccaatatcatggg
gctgcacgatcagcttattcaaaagagttgagctcattggccaaagctgggttgccacct
ccatttaatgttcttcttgtttgctattcactttttgaaagacacagtgcacagcagaaa
gatgaccgcaaaattcttaaacgttggcgatggagctgtgtgcttatggatgaagcccat
gccttgaaggataaaaacagttatagatggaaaaacctaatgtcagttgcacaaaatgcg
aaccagcgtctaatgctgacagggacaccattgcaaaatgatttacatgagctatggtcg
ctgttggagtttatgatgcctgatcttttttgtactgaggatgttgacttaaaaaagtta
ctaaatgctgaagatagagagttgattggccgtatgaaatccattttgggaccatttatt
ttgagacgtttaaaatctgatgtaatgcagcaacttgttccaaaaatacagcaggttgag
tatgttgtaatggaaaagcaacaagatgacacctatagagaatctattgaggagtatcgt
gcagcttcacgagctcgtatggcaaaaagttcagatgttaactctaataatatatttaaa
gttcttcctcggcggcagatttccaattactttgttcagtttcgtaagattgcaaatcat
cctttattggtgaggcgtatttacagtgatgaggatgttgttcggtttgctaaaaagtta
tatccaatgggtgtctttggctttgaatgtacattagataaagtgattgaggagcttaag
agttataatgacttttctatccaccgggttttgctttactataatgtcagtgatgcgaag
ggatccctctcagacaaatatgttatgctttcagcaaaatgtcaggcattagctgaactt
ctcccttcacttaaacaagatggacatagggttctgattttcagtcaatggacatcaatg
cttgatatcttggagtggactttggatgtgattggggttacatatagacgtcttgatgga
aggagattgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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