KEGG   Ziziphus jujuba (Chinese jujube): 107432059
Entry
107432059         CDS       T04794                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107432059
   03015 mRNA surveillance pathway
    107432059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107432059
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107432059
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 107432059
NCBI-ProteinID: XP_015898601
UniProt: A0A6P4B8I0
Position
11:complement(join(7936167..7936223,7936405..7936490,7936616..7936724,7936989..7937390,7937828..7937893,7938296..7938520,7938778..7939071,7939212..7939517))
AA seq 514 aa
MADNTATATTPPENKPQPTPTKRWADEVDEPPIMADNTATATTLPESKPQLTPTKRWGDE
EDDPVEESTISSSSLELENLKIDENKKINKFLDDPEDSNIKAVTSGDTPYSSASTFEDLN
LSPELLKGLYVEMKFQKPSKIQAISLPMILTSPYKDLIAQAHNGSGKTTCFVLGMLSRVD
PNLKAPQALCICPTRELAIQNMEVLRKMGRYTGISSECAVPDSTNHINIYKRPPVSAQIV
IGTPGTIKKWMSAKKLGASNVKILVFDEADHMLAEDGFKDDSLRIKKDIERSSRHCQVLL
FSATFNETVKNFVSKIVKDYNQLFVKKEELSLDAVKQYKVFCPDELTKIQIIKDRIFELG
ENLGQRIIFVRTRNSASMLHKQLVDDGYSVTTIQGANTPEERDKIVREFRDGLTQVLIST
DLLARGFDQQQVNLVINYDLPVKHETQEPDYEVYLHRIGRAGRFGRKGAVFNFIYGGRDE
EIMAKIEQYFGAQVTEVKNSDEAFQDALKAAGLL
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggccgataacaccgccaccgccactacaccgccggaaaacaaacctcagccgacgccg
acgaagcgatgggctgacgaagtggacgaacctccaatcatggccgataacaccgccacc
gccactacactgccggaaagcaaacctcagctgacgccgacgaagcgatggggtgacgaa
gaggacgaccccgtcgaggaatcgacgatctccagttcgagtttggagcttgagaacttg
aaaatcgacgagaacaagaagattaacaagttcctcgacgaccctgaagactccaatatc
aaagccgttacgtcgggggatacgccgtattcatcggcgagtacgtttgaggatttgaat
ctgtcgcctgagctgttgaagggtttgtacgtggagatgaagttccagaagcccagtaag
attcaagctataagtttgccgatgatattgacttctccatacaaggatttgatagctcag
gcacataatgggtccgggaaaactacctgtttcgtgcttgggatgttgagtcgtgttgat
ccaaacctcaaggctcctcaggctctttgcatctgtcccactagggagttggctattcag
aacatggaagttcttagaaagatggggaggtacacaggcataagttcggagtgtgctgtt
ccagacagcacaaatcatattaacatttacaaacggccaccagtttctgcacaaatagtg
attggaactcctggtacaataaagaaatggatgtcggcaaagaaattgggtgcatctaat
gtgaagattcttgtttttgatgaggctgatcacatgctggctgaggatggctttaaagat
gattccttaaggattaagaaggatattgagagaagtagtcgtcactgccaggtgcttctg
ttttctgctacatttaatgaaaccgtcaagaattttgtttctaagatagtcaaagattac
aatcaactttttgtgaagaaagaagaactatctctggatgctgtgaaacagtacaaagtg
ttctgtcctgatgaactcaccaagattcaaattattaaagatagaatatttgaactagga
gagaacctggggcaaagaattatatttgtgcgcacaagaaatagtgcaagcatgctgcat
aagcaacttgttgacgacggttattcagttactaccatccaaggtgctaacactcccgag
gagagggataaaatagtcagagaatttagagatggtttgactcaagttcttatatcaacc
gacctgcttgctcgaggctttgaccaacaacaggtcaatttggtaataaattatgatctc
cctgtgaaacatgaaactcaagagccagattatgaggtgtatttacatagaattggcagg
gccgggcgttttggtcgcaagggagctgttttcaattttatttacggtggtagggatgaa
gaaatcatggctaaaattgagcagtattttggcgctcaagtgacagaggtcaagaatagt
gatgaagcctttcaagatgctctgaaggccgctggtttactgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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