KEGG   Zea mays (maize): 100381870
Entry
100381870         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100381870
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
zma  Zea mays (maize)
Pathway
zma03013  Nucleocytoplasmic transport
zma03015  mRNA surveillance pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100381870
  09122 Translation
   03013 Nucleocytoplasmic transport
    100381870
   03015 mRNA surveillance pathway
    100381870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100381870
   03041 Spliceosome [BR:zma03041]
    100381870
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100381870
Spliceosome [BR:zma03041]
 Complex C
  Other components
   EJC/TREX
    100381870
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 100381870
NCBI-ProteinID: NP_001168126
UniProt: C0P2G1
Position
9:complement(125131364..125136790)
AA seq 732 aa
MSSYPVLNNRPIDQWRVTDLKDELRKRKLPVKGLKEELVRRLFDSIQSEIEADEADEADE
DVGVNVDDQLPDANASEENTVTVTEVHQETVVHVTQQVEVPTTKAGQESTISPTRRAPSV
DVEEASADEEVPESVAEGNMSFEEVQVHTEITNEPVHEKTTDVDTNDTVVVNDAIDVNSD
LAPAEVKFGATEASKIEEHDFPPAPVDALNSDAAGPMDTDVVTAATSDVGSMDTDVVTRA
PVSDDEEKLELKVDLGNKVSMYDEDNNSSDTMNEDCKPIVSKPNNQVPEVSPDLGSQIKC
ESISTDNLSSNKKNTIKDNLNANNFDLELEVQPKMVQPSSGITSLGGDLQPLDDDKELVK
NQTSLEDIDSTANVDSYKKDSPEGGSPEKLNLDRSSGDESMEEDVVEIKQDEANMKSDDL
GQKNELNSEDVKEVILPDSVVEASKEVTAEEKSAASTEKRKLEDEDIANTEPIKRQRRWT
ADVAKVPERQALSQTGPETPKDIFQPAFKRSFGRSDSTASVDSPKERIVPPAEKPATTSL
RIDRFVRPFTLKAVQELLGKTGSVQDFWMDHIKTHCYVTFSSVDEAMATRDAVYNLQWPP
NNGNKLVAEFVDPQEVKLKVDPPPPPAAPVSPAAITRAPPLQQTQSVPRQAATPKEQLPP
PPPPPLAKPPMADPAAIARERLPPTPKKPEPPVVTLDDLFRKTQSSPRIYYLPLSEEEVA
AKLAAQGKGKKE
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtcatcttatcctgtgctaaacaaccgaccaattgatcagtggagggttactgatttg
aaggatgagctccgtaaaaggaagcttcctgttaaaggtttgaaggaggaactcgtaagg
cgactctttgactccattcagagtgaaatagaagctgatgaagctgacgaagctgatgag
gatgtgggagtgaatgtggatgatcagttgcctgatgccaatgctagcgaggaaaataca
gttaccgttacggaagttcatcaggaaactgtggttcatgtcactcagcaagttgaagtt
cctaccaccaaagctggtcaggaatccacaatttctcccactagaagggcccccagtgtc
gatgttgaagaggcctcagcagacgaagaagtacccgaatcagttgctgaaggaaatatg
tcatttgaagaagtgcaagtgcatactgaaattactaatgagcctgttcatgagaagacc
acagacgttgacaccaatgatacagttgttgttaatgatgcaatcgatgtgaattcagac
ttggcgcctgctgaagtcaagtttggtgctacggaagcaagcaaaattgaagaacatgat
ttcccccctgcacctgtagatgccttaaattcagatgctgctggtcctatggatactgat
gtcgtcacagctgcaacttcagacgttggttctatggatactgatgttgtcacacgtgca
ccagttagcgatgatgaggagaaactggaactgaaggttgatttgggtaacaaggtgtca
atgtatgatgaagataacaatagttctgataccatgaatgaggactgcaagcccatcgta
tcaaaaccaaacaatcaggtacctgaggttagtccagatttagggtctcaaattaagtgt
gagtcgatttctactgataatctatcatctaacaaaaagaatactataaaagataattta
aatgctaataattttgatttagaattagaggttcagccgaagatggtccaaccatcatcc
ggcattacttcattaggtggagatttgcagccattggatgatgacaaagagctggttaag
aaccagacatctttggaagacatagattccacagctaatgtggactcatacaagaaggat
agtcctgaaggtgggtctccagagaaattaaatctagacaggagttcaggtgatgagtca
atggaggaggatgttgtggaaattaaacaagatgaggccaatatgaaatctgatgatctc
ggacaaaagaatgagcttaactcagaagatgtgaaagaggtgatcctccctgattctgtt
gttgaggcttccaaggaggttacggctgaagaaaagtcagcagcttcaacagaaaagaga
aaacttgaagatgaagatattgcaaacactgaaccaatcaagcgacaacgtcggtggact
gcagacgttgccaaagttccagagagacaagcattgagtcaaactggtcctgaaactcct
aaggatatttttcagcctgctttcaaacgatcttttgggaggtctgattcaacagcaagt
gtagattctcctaaggaacggattgtaccacctgcagagaaacctgccacaacttctttg
agaattgaccgatttgtacgcccatttaccctgaaagctgtgcaggagcttcttggtaaa
actggatctgtacaagacttctggatggaccatatcaagactcattgctatgtgacattt
tcttcggtggatgaagcaatggctactagggatgctgtttacaacctacagtggccccca
aataacggcaataagttggtcgccgaatttgttgatcctcaggaagtgaagctcaaggtt
gacccccctcccccgccagctgctcctgttagcccagctgctatcacaagggcacctcct
cttcaacagactcaaagtgtgccacgccaggctgctacaccaaaagagcaactgccacct
ccaccaccgcctccccttgctaagccacctatggctgacccggcggctatagcgagagag
aggcttccacccactccgaagaagccagagcctcctgttgtgacacttgatgatctcttc
aggaagacacagtcctctccaaggatctactatctgcctttatcagaagaggaggtggca
gccaagctcgccgcacagggcaaaggaaaaaaggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (20)   
   RefSeq(nuc) (4)   
   GenBank (8)   
   EMBL (8)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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