KEGG   Zea mays (maize): 103633605
Entry
103633605         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC103633605 isoform X1
  KO
K06100  symplekin
Organism
zma  Zea mays (maize)
Pathway
zma03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103633605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    103633605
   03019 Messenger RNA biogenesis [BR:zma03019]
    103633605
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     103633605
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     103633605
    U7-dependent histone pre-mRNA processing factors
     103633605
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT HEAT_2 Adaptin_N
Other DBs
NCBI-GeneID: 103633605
NCBI-ProteinID: XP_008653537
UniProt: A0A1D6IPH9
Position
7:183788683..183809362
AA seq 1242 aa
MLAARNPPPPPHDIAARLHHLRDLRRVPLPNRVARIADLHTDEASPVRKLVAEIIGELGS
KHMRYLPDMIPCLLHLLNDETPAVVRQAVKTGTNLFAKVLQKLAIQGLFSNGGIDDALKS
SWEWLLKFKSGVSHMAFQATGNEGVRLLAIKFVEKTVLMYTPDPDVPSDPPTETTEDMAF
NVAWLRGGHPLLNVGDLAMEASQSLGLLLEQLKSPKVKSLSTSMIIVFVTSLSAIAQRRP
SFYGRILPVLLSLDPASSIIKLRVPGAFHALKSAFSACLKCTHSSAEPWRARLLEAQNII
NQGGSIEDAANAAKNFGDTSNREESWPLMERSTDGSNKRSLAEDMNHVTEDDVHSTKRAR
QSIDANEHSEEANKTNFESMSVDISSSQPSSIRTGNSEAVYQLIGMFAALAAQGDRAAGS
LQILSYSIASDLLAEVVMVNMQHLPISRPEVDQQQLPSTSSGDGLPLSSFSSLLGILLKG
ANQIDQDEVSPAKEPALVSSVADDRMILPANSPVPSSVNLPIEENSNSPTVPLCIETTEA
KVTSAGGNSSIDIPESSEASHASTEPQGTQEHASTFAGPFPADNFSVGFSLAQSSETRSP
SSSTLEANHSQLSSLSSQYVLPKLVVNNIDLSDEAKDLLQKEAFVRILESDKKEASGGSI
ARLPLLAHLGVEFPLEFDPWVILQKHILSDYANNEGHELTICILNRLYHEAEQDHDFLSS
RTATSVYESFLLNIAENLRDMFPASDKSLGKLLCEIPYLPEGVLKLLESLCSPGSNERQD
KDIQSGDRVTQGLSAVWNLIMLRPSNRDRCLEIALQSSTHHLEEVRMKAIRLVANKLFPM
TSISKKIEDFANEKLNSVLEMTPSGDCVTTEMATPEAHKDIGLENLTASVTGMQTLMSLY
FALCTKKHSLLRHVFAIYGNLPQAAKQAVHQQVPILIRTIGSSSDLLGIISDPPADCRDL
LMQVLQTLTDAAVPSKDLISSIKILYSKTKDVEFLFAILVHLPKDEVLPVFPSIVNLPID
KFQSAISRILQGSPRNGPSLDPSEILIAIHVIAPDKEGIPLKKVMDACSSCFEQRTIFTQ
QVLAKALNQLVEQIPLPLLFMRTVMQAIGVFPALVDFVMEIMSRLVSKQIWKYPKLWVGF
LKCAILTKPQSYGVLLQLPAPQLENALSKNPTLKTPLAEHAEQPNIRSTLPRSTLVVLGL
AEDQPQQPAVTQVQSSQNQAAETSSSAADTATEVTQESSGAS
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgctggccgcccggaacccccctccgccgccccatgacatcgccgcgcgcctccaccac
ctgcgcgacctccgcagggtgccgctccccaaccgcgtcgcgcgcatcgccgacctccac
accgatgaggccagccccgtgcgcaagcttgttgccgagatcatcggtgagcttgggtca
aaacacatgaggtatctacctgatatgatcccttgtttgctgcaccttctgaatgatgag
acgcctgcagtcgtcaggcaagctgttaagacaggaaccaacttgtttgccaaagtactc
caaaagctagctatccagggtttattctccaatggagggattgatgatgcacttaaatca
tcatgggaatggctgctcaagttcaaatcaggtgtctcgcacatggcatttcaggccacc
ggcaatgaaggtgtcaggttactggctattaagtttgttgaaaaaacagttcttatgtac
acaccagatcctgatgtcccatctgatccgccaactgaaacaacagaagatatggcattc
aatgtagcttggttacgaggaggtcaccctttgcttaatgttggggatctggccatggaa
gccagccagagtcttggattgttgctagagcagctcaagtctcctaaagtaaagtcactc
agtacttccatgatcattgtcttcgttactagtctctcagctattgcccaaagaaggcct
tcattttatggacgcatattgccagttttactttccttggatccagcaagttctattatt
aaattgagagtcccgggcgcattccatgccttgaagagtgccttctctgcatgcctgaaa
tgcacacattcaagtgctgagccgtggcgagcacgcctattggaagctcaaaatattatc
aaccaagggggttcaatagaagatgcagcaaatgctgctaagaatttcggggacacttca
aacagggaagaatcgtggcctctgatggagagaagcactgacggtagtaacaagcgtagt
ctggctgaagacatgaatcatgtgacagaggatgatgtccactccactaaaagagccagg
caatcaattgatgctaatgaacatagtgaagaggcaaacaagacaaattttgagtcgatg
tctgttgatatctcatctagccagcccagctctataagaactgggaattcagaagctgtg
tatcaattaattggtatgtttgctgcactagctgcacaaggtgacagagcagctggatca
ctgcaaatcctttcatacagtatcgctagtgacttactagcggaggtggtaatggttaac
atgcaacatctcccaatctctcgtcctgaagttgaccaacagcagcttccttctacgagc
tctggagatggacttccactttcaagtttctcctctctgctggggattctgctgaaggga
gcgaaccaaattgatcaagatgaagtgtctccagctaaagaacctgcgctggtgtcgtca
gttgcagatgacagaatgatacttcctgctaattcacctgttcctagctcagtaaatcta
cctatcgaagagaacagtaacagtccaacagttccattatgtatagaaacaacagaggcc
aaagtaaccagtgcaggtggcaatagttcgattgatattccagaatcatcagaagcttcc
catgcctcaacagagccccagggaacccaagagcatgctagcacttttgccggtccattt
cctgctgataatttctcagttggatttagtttggcacaatcgtcagaaactcgcagccca
agctcttctacattggaagcaaaccactcacagctttcatcccttagttcacaatatgtt
cttccaaagttggttgtcaataatattgatctcagtgatgaggccaaagatctccttcaa
aaagaggcgtttgtgcggattcttgagagtgataagaaagaagcatctggtggttcaatt
gctcgccttccgttgcttgctcacctgggtgttgagtttcctctggaatttgatccttgg
gtgattcttcaaaagcacattctctctgattatgcgaataatgaggggcacgagttgact
atatgcatcctgaaccggctatatcatgaggcagagcaggatcacgatttcctttcatct
agaactgctacatcagtttacgaatcctttcttctaaacatagctgaaaatcttcgagac
atgtttccagcttcagataagtcacttggcaaattgctttgtgagataccatacttacca
gaaggtgtgctgaaactgcttgaaagtttatgttctcctggaagtaatgagaggcaggac
aaggatattcagagtggtgatagggtaactcaaggtctcagtgctgtctggaaccttatc
atgctaagaccttcaaatcgggacagatgtctggagattgctttgcagagttcaactcat
catctagaggaggtccgcatgaaggcaatacgtttggtggcaaataagttatttcctatg
acaagcatttccaaaaagattgaagattttgcaaatgaaaaacttaattcagtgctggaa
atgactccatctggtgattgtgtaactactgaaatggctacacctgaagcacacaaagat
attggtttagaaaacttaacagcttcagtaacaggcatgcagactctgatgtctctatac
tttgcattgtgcaccaagaaacattcccttctcagacatgtatttgcaatatatggtaat
ctaccgcaagctgccaagcaggcagttcatcaacaagtaccaattctgatacgcactata
ggctcctcctctgatcttcttggaatcatctcagatccaccagctgactgccgggacctc
ctcatgcaggttttacaaaccctcactgatgctgcggttccatctaaagatctgatttct
tccataaagatcttatattctaaaacaaaggatgttgagttcctttttgcaatcttggtt
catctaccaaaagatgaggtcctgcctgtgttccccagtattgttaatcttccaatagac
aagtttcaaagtgccatttcccgaatcttgcagggatcacctcggaatggcccttcactt
gatccatcagaaattttaattgcaattcatgtaatagctcctgataaggaaggaatacca
ctcaaaaaggttatggatgcatgctcttcttgctttgagcaaagaacaatatttacccag
caagttctggcaaaagcactaaatcaactggttgaacagattcctcttcctttgctattc
atgaggactgtcatgcaagcaataggtgtttttcctgcattggtggattttgtgatggag
atcatgtcacgccttgtgagcaagcagatttggaaatatcccaagttatgggtaggattt
ctgaagtgtgctatcttgacaaaacctcagtcatatggtgtgttgctgcagttaccagct
cctcaacttgagaatgccttgagtaagaacccgacactgaagacgcccttggctgagcat
gccgagcagccaaatattcggtcgacacttccaaggtctactttggtggttctgggtctt
gctgaagatcaaccacagcaaccagcagtaacacaggtgcagagcagccaaaaccaggct
gcggaaaccagtagctctgctgctgatacggctacagaagtaactcaggaatcttctggt
gctagctaa

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