KEGG   Zea mays (maize): 103651319
Entry
103651319         CDS       T01088                                 
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
zma  Zea mays (maize)
Pathway
zma03022  Basal transcription factors
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103651319
  09124 Replication and repair
   03420 Nucleotide excision repair
    103651319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    103651319
   03400 DNA repair and recombination proteins [BR:zma03400]
    103651319
Enzymes [BR:zma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103651319
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103651319
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103651319
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom
Other DBs
NCBI-GeneID: 103651319
NCBI-ProteinID: XP_008675159
UniProt: A0A1D6NF15 A0A3L6FKQ9
Position
3:complement(212424806..212433246)
AA seq 767 aa
MAGGDGDRHRAPKRHKSSTPSKAALVDESAEFDYADDFDDDAHDADTEVKKRDFTKLELK
VDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS
VGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSTL
LRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFEIDP
SQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGR
ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENISRF
TSDNKEKFTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMF
RKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW
CPMTKEFFAEYLKKENSKKKQVLYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT
TYAMKLRKPMIFGATSHAERTRILYQFKNSPEVNTIFLSKVGDNSIDIPEANVIIQISSH
AGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ
GYSFKVITSLPPAEEGPNLSYYTLDEQLELLSMALNAGDDMIGVERLEEDSDGKALIRAR
RSAGSMSAFSGAGGMVYMEYSTGKGKGVQKKHKDPSKRHHLFKKRYA
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggccggcggcgacggcgatcggcatcgcgcgccgaagcggcacaagtcctcgacgccg
tcgaaagcggccctggtggacgagagcgccgagttcgactacgctgatgactttgatgac
gacgcccacgatgctgatacggaggttaagaagagggattttacgaagctcgagttgaag
gtggaccacgcgagccgtccgctctgggcgtgcgccgacggccgcatcttcctcgagacc
ttctcgccgctctacaagcaggcttacgattttctcatcgccatcgccgagcctgtgtgc
aggccagaatctatgcatgaatacaatctaactccccactcattgtatgctgcggtctca
gtgggacttgagacaagcactatcatcagtgtcttgagtaaactatctaaaaccaagttg
ccccgtgaaataattgatttcatccatggatcaactgctaactacggcaaagtcaagctt
gtcttgaagaagaaccgatattttgtcgagtctccatttcctgaggtattgagtaccctt
ctgagggatgaagttatatctagagctaggatatctcctgaggattcccttggggcacct
tcatttactgttagcaagacatctggccaaatagctagtggacatgaagacctgttaaat
ggaatggaaattgctgctgcaactgaagacaaggaaacacattcttttgagattgatcct
tctcaggttgagaatgtcaagcaacggtgcttaccaaatgcattgaactatcccatgctg
gaggagtatgatttcagaaatgacactgtaaacccagatttggatatggagctaaagccg
caagcacggcctaggccatatcaagaaaagagtctcagtaaaatgtttgggaacggacga
gcaaggtctggaattattgtgctaccttgtggtgctggcaagtccttggttggtgtatct
gcagcctgtcgtattaagaagagctgtttatgtttggccacaaatgctgtctccgtagat
caatgggcatttcagttcaagctttggtcgaccataaaagatgagaacattagtcgtttt
acatctgataacaaggagaagtttacagggatggctggtgtggttgttactacatataac
atggttgcattcggtggtaaaaggtctgaagattcggagaagatcattgaagaaatccga
aacagagagtggggcttgcttctaatggatgaggtccatgttgtccctgcacatatgttc
agaaaagtcatcagcattactaaatctcactgcaagctgggtcttactgctacccttgtg
agagaggacgaacgtattactgacctgaattttctaattggaccaaaactgtatgaagcg
aattggttggatttagtcaaaggtggatttattgcaaatgtgcagtgtgcagaagtatgg
tgtcctatgaccaaagagttctttgctgagtatttgaaaaaggaaaattcaaagaagaag
caggtactgtatgtcatgaatccgaacaagttcagggcttgtgaattcctgattcgattc
catgagcaacaacgtggagacaagataattgtgtttgctgataatctgtttgcactaact
acttatgcgatgaaactgcgcaagccaatgatttttggtgccacaagccatgctgagagg
acaagaattctctaccaattcaagaacagtccagaagtcaatacaatttttctttcaaag
gtcggtgataactcgattgatatcccagaagctaatgttatcatacaaatatcatctcac
gctggttcgagacgtcaagaagctcagcgtctgggccgtattctcagagcaaagggtaaa
caccaagataggatggctggaggaaaagaagaatacaatgcttttttctattcccttgta
tcaactgacacacaggaaatgtactactcaacaaaaaggcagcagtttcttattgaccag
ggatatagcttcaaggttatcactagtttgccgccggctgaagaaggacctaatctgagc
tattacacacttgatgaacaacttgagctcttgagcatggcgctgaatgcaggggatgac
atgattggtgttgagcgcttagaagaagattctgatggcaaggctcttattagagcacga
cgctctgccggatcaatgagtgccttctctggagctggtggaatggtctacatggagtac
agcactgggaagggaaagggtgttcagaagaaacacaaggacccgtcaaagaggcatcat
ctgttcaagaaacgctatgcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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