KEGG   Zootermopsis nevadensis (dampwood termite): 110831250
Entry
110831250         CDS       T05136                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5
  KO
K15172  transcription elongation factor SPT5
Organism
zne  Zootermopsis nevadensis (dampwood termite)
Pathway
zne03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:zne00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110831250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zne03021]
    110831250
   03019 Messenger RNA biogenesis [BR:zne03019]
    110831250
Transcription machinery [BR:zne03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     110831250
  RNA polymerase I system
     110831250
Messenger RNA biogenesis [BR:zne03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     110831250
SSDB
Motif
Pfam: KOW Spt5-NGN Spt5_N CTD DUF3912 Ribonuc_P_40
Other DBs
NCBI-GeneID: 110831250
NCBI-ProteinID: XP_021922716
Position
Unknown
AA seq 1153 aa
MSDSEGSNFSDNESERGSNQQSDSDVEEVRSDLASGDEDRQSRSPSRSSARSRSVSRSRS
PSRSRSRSPSQSRSRSRSQSRSRSRSRSKSQSEEDDERRSDDQRDDEAEEARPGEEEDEE
VEDEQEPEGEDLNSEDEDEYDEEEEEEEDDRPRKKKKKDRFGGGFIIDEAEVDDEVEDED
EWEEGAQEIGIIGNEFDEHGPTAREIEGRRRGTSLWDSQKEDEIEEYLRKKYADESIPIR
HFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKSTVMHMMRKYIAYQFSSEPLQI
KSVIAPEGVKGYIYIEAYKQPHVKQAISNVSNLRMGQWTQQMVPVKEMTDVLRVVKEQTG
LKVKQWVRLKRGLYRDDIAQVDYVDLAQNQVHLKLLPRIDYTRFRGALRSTQTENDSAKR
KKKRRPPAKPFDPEAIRSIGGDVASDGDFLIFEGNRYSRKGFLYKNFTMSAIIADGVKPT
LSELERFEEAPEGIDIELPSTGAGGKDDITSHNFSAGDNVEVCEGELVNLHGKILAIDGN
VITVMPRHEDLNEPLEFQANELKKYFRHGDHVKVLGGRYEGDTGLIVRVEENRVVLFSDL
TMHELEVLPKDVQLCSDMATGVDSQGQFQWGDCVQIDPQTVGVIVRLERENFHVLNMQGK
VVEARPQALQKRKDSRYAVALDSEQNTIQKKDIVKVIDGPHAGRSGEIKHLYRNFKXNSR
MYLDNGGIFVCKTKHLQLAGGAKVTMSPGGGGFGGFMSPRITSPLHPSGAGHGGGGGGRG
RGRGGAGVRRDRELIGQTIKITGGPYKGNVGIVKDATESTARVELHSTCQTISVDRSHIA
SVGVPTKEGSFSSYSRTPAYGGGSQTPMYREGSKTPMHGSQTPMYDAGSRTPHYGSMTPS
HDGSRTPGQSGAWDPSITNTPARNNDFDGYSLDDASPSPNYNPSTPGYQAGGPYTPQTPG
TMYGSDQSFSPYQPSPSPTVYNGTPTGYVATPSPSGYTPSPTSAAPYGTPSPLGYSPMTP
GAAPSPYNPHIPGSGHDQQATLQQEWQTTDIEVRIRDTHDDAGLSGQTGVIRGISGGMCS
VFLPDEDRVVNIVSEHLEPIVPQRSDQVKVILGEEREAVGQLLSIDNQDGVVKLTSGEVK
MLQLRFLCRMKKL
NT seq 3462 nt   +upstreamnt  +downstreamnt
atgtccgattcagaaggaagcaatttttcggacaatgaaagcgaacggggaagtaatcaa
cagagtgatagtgatgttgaggaggtgagatccgatttggcatctggagatgaggaccgg
cagtctagatctccatcaaggtccagtgcaagatctcgttctgtgtccagatcaagatct
ccatctcggtcacgttcgcgttcaccgtcccaatcccgttcgaggtccaggtcgcagtcc
cgatctagatctagatcaaggtccaaatcacagtctgaagaggatgatgaacgcagatct
gatgatcagcgagatgatgaagcagaagaagcaagacctggtgaagaggaggatgaagaa
gtggaggatgaacaggaaccggaaggagaagacttgaattcagaggatgaggatgaatat
gatgaagaggaggaggaggaggaagacgaccgtccacgtaaaaagaaaaagaaggaccgt
tttggtggagggtttatcatagatgaagccgaagtggacgacgaagtcgaggatgaagac
gagtgggaggaaggtgcccaggaaatcggaataatcgggaatgagtttgacgaacacggg
ccaactgcaagggaaattgaagggcgccgacgtgggaccagtctctgggactctcaaaaa
gaagatgagattgaagagtaccttagaaagaaatatgctgatgaatctattccaatacgg
cactttggtgatggaggagaagagatgtccgatgagattacccagcagaccctgctccct
ggagtgaaagatccaaatttatggatggtgaagtgccgcatcggagaggaaaaatcaact
gtcatgcatatgatgagaaaatacattgcataccaattcagcagcgaaccattgcagatc
aagtctgtgattgctccagagggcgtgaaaggatatatttacatcgaagcatacaaacag
ccccatgtgaaacaagcaatttcgaatgtcagtaatttgaggatgggacaatggactcag
cagatggtgcctgtgaaggaaatgacagatgtacttcgtgtagtgaaagaacaaactggt
ctgaaagtgaagcagtgggttcgtctcaaacggggcctgtacagggatgatatagcccaa
gtagactatgtggatcttgcccagaaccaggtccacttgaagctgctgccacgcatcgat
tacacccgttttagaggagcgttgcgtagcactcagactgagaatgactctgccaaaagg
aagaagaaacgtcgcccgcctgctaaaccttttgatcccgaggccatcagaagtattggt
ggagatgtagcttcagatggagacttccttatatttgagggcaaccgttactcaagaaag
ggcttcttatacaaaaacttcaccatgagcgcgatcatagcagatggagtgaagcctact
ttgtcagagttggaacggtttgaagaggctccagaaggcattgatatcgagttaccgagt
actggtgccggagggaaagatgacatcacatcccataacttctcggccggtgacaatgta
gaagtgtgtgaaggtgaattggtgaaccttcatggaaagatattggccattgatggcaac
gtcatcaccgtcatgccgagacacgaagaccttaatgagccactagaattccaagccaat
gagctgaagaagtattttagacacggtgatcacgtgaaagtactaggaggtcgatatgag
ggagacacaggtctgatcgttcgagtagaagaaaatcgtgtcgtgttgttttctgacttg
actatgcatgagttggaagtacttccaaaggatgttcaactctgttctgatatggctact
ggtgttgattctcaggggcagttccagtggggtgattgtgttcagatagatccccaaact
gtgggtgtgatcgttagactggaacgagagaactttcatgttcttaatatgcaaggcaaa
gtggtagaggcgagacctcaggctcttcagaaaagaaaggattcgagatatgctgtagcc
ttagactctgagcagaataccatacagaagaaagacattgttaaagtcattgatggacct
catgcgggtcgtagtggagagatcaaacatttataccgtaattttaaanaaaactctaga
atgtatctcgacaatggtgggatatttgtatgcaagacgaagcatcttcaattggctgga
ggtgctaaggttaccatgtcacctggtgggggtggttttgggggatttatgtcaccccgt
attacttctcccctgcatccctcgggagcagggcacggtggtgggggaggaggacgaggg
cgtggtcgtggtggcgcaggtgtgagacgagacagagaattgattggtcagactatcaaa
atcactggtggtccttacaaaggaaatgtaggtattgtgaaagatgcaactgagtcgaca
gctcgagttgaattacattctacttgtcagacgatatctgtggatcgatctcacattgca
agtgttggggtacctacaaaggagggatcctttagctcatatagtcgcacgccagcatat
ggtggtgggagtcagacacctatgtacagggaaggaagcaagacaccgatgcatggttca
cagactcccatgtatgatgctggatcacgaactccacattatgggagcatgacgccatca
cacgacggctcacgtacgcctgggcagtcaggagcctgggatccaagtattaccaacaca
cctgcaaggaacaacgattttgatggatattctttggatgatgcatcaccctcacctaac
tataatcctagcactccaggttaccaggcaggaggaccgtacacgccgcagacaccgggt
acaatgtatggatctgaccagtctttttcgccttatcagccatcaccatctcccactgtg
tacaatggaacgccaactggatatgttgcaacacccagtccatctggatacacaccatct
ccgacgagcgctgccccatacggtacgccatcccctcttggctacagccctatgacgcct
ggagcagctccatctccatataaccctcacattcctggttcggggcatgaccagcaggca
acattacagcaagagtggcaaacaactgacatagaagtgcgcatcagggacacacatgac
gatgctggattaagtggacagacgggagtaatcagaggaatctctggtggaatgtgctca
gtgttcttgccagatgaagatcgagtagtgaacattgtttctgaacatttggagccaatt
gtaccacagcgttctgatcaagtgaaagtaatattaggagaagagcgggaggctgtgggg
cagctcctgtccattgataaccaggacggagttgtgaaacttacgtcaggcgaagtgaag
atgctccagttgcggttcctgtgtcgaatgaagaaactgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (428)   
   KEGG ORTHOLOGY (1)   
   RefGene (424)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (441)   

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