KEGG   Zymobacter palmae: ZBT109_2133
Entry
ZBT109_2133       CDS       T05646                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
zpl  Zymobacter palmae
Pathway
zpl02020  Two-component system
zpl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:zpl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ZBT109_2133
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ZBT109_2133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zpl03021]
    ZBT109_2133
Transcription machinery [BR:zpl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ZBT109_2133
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Spore_III_AB
Other DBs
NCBI-ProteinID: BBG30870
UniProt: A0A348HGW8
Position
2342708..2344150
AA seq 480 aa
MMTPSLQLNIGAHLTMTPQLQQAIHLLQLSTLDLRREIELAVEHNPMLMLVDTFDDAYEL
ALEDDWSAAENTDSEESFDDAGIDEEREGMLAEGLINPTAPSSGGTEGPDIERNAREETL
KDVLYRQASLLPLNDQQQLIADALIDALDERGYLSQPLNELRDGLNAQLREPVSDTDMHA
VLSQLQQLEPTGVFARDLSECLLLQLNTLPSDTPLLPQARRLVRQFLEILAAHDFKRLKR
RLTLDDESLDEIIAMIRRLDPAPGRLYSSETDNYVIPDLVLRRHPRQGGEVELNPLALPR
VSLHDEYVHLIRRGDRSEGNQFLRHHLQEARWLMKSLSSRNDTLLKVGREIIRRQHAFLD
HGEEAMKPLVLADIAEVVGLHESTVSRVTTQKYIHTPRGLFELKHFFSSHVGQAGDAHSS
TAIRAKLKKLIAQEPPHKPLSDARLVALLAEDDITVARRTVAKYRESMGIPASSERKRLA
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgatgacaccctctctgcaactcaatatcggcgctcacctcacgatgacgccacaatta
cagcaggccattcacctgctgcagctttcgacactcgacctccgccgtgagattgagtta
gccgtagagcacaaccccatgctgatgctcgtcgataccttcgacgacgcatacgaactc
gcactcgaagatgactggagcgctgccgagaatacggacagcgaagagtcgttcgacgat
gcgggcatcgatgaagagcgtgagggcatgctggccgaggggctgatcaatcccacggcg
ccgtcatctggcggtaccgaaggccccgatatcgaacgcaatgcacgtgaagaaacgctc
aaagacgtgctgtaccgtcaggcctcgctactgccactcaacgatcagcagcagctcatt
gccgatgcgcttatcgacgccctcgatgaacgcggctatctgagccagccgctgaacgaa
ctgcgcgatggcctcaatgcccagctgcgcgagccggtcagcgataccgacatgcacgcg
gtgctcagccagctgcaacagcttgaaccgacaggcgtcttcgcccgcgatttgtccgaa
tgcctgctgctacagctcaacacactgcccagcgatacaccgctgctgccacaggctcgg
cgtttagtacgccagttcctagagattctggccgcgcacgacttcaaacggctcaagcgt
cggctcacgctggacgatgaatcacttgatgagatcatcgcgatgatccgacggttggat
ccagccccgggacggctctacagcagcgaaacggacaactacgtcattccggatctggtg
ctgcgtcgacacccgcgtcagggcggtgaagtcgagctaaatccgctcgccctgccccgc
gtgtcgctgcacgatgagtacgtgcacctgatccggcgcggtgatcgcagcgaaggcaat
cagttcctgcgccaccacttacaggaagcacgctggctgatgaaaagcctgagcagccgc
aacgacaccctgctcaaagtcggacgagaaatcatccgccgccagcatgcgttcttggac
catggtgaagaagccatgaaaccgctggtgctggccgacatcgcggaagtggtcgggctg
cacgagtccacggtctcacgcgtgacaacgcaaaagtacatccacaccccacgcgggttg
tttgagctgaagcatttcttctcgagccatgtgggccaggccggcgatgcgcactccagc
accgctatccgcgccaagctgaagaagctaatcgcacaggagccgcctcacaagccactg
tcggatgctcggctggtggcactgcttgccgaggatgacatcacggttgcacgacgcaca
gtcgcgaagtatcgtgaatctatgggtattccagcgtccagtgagcgcaagcggctggcg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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