KEGG   Zygosaccharomyces rouxii: ZYRO0A11176g
Entry
ZYRO0A11176g      CDS       T01118                                 
Name
(RefSeq) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03022  Basal transcription factors
zro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ZYRO0A11176g
  09124 Replication and repair
   03420 Nucleotide excision repair
    ZYRO0A11176g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zro03021]
    ZYRO0A11176g
   03400 DNA repair and recombination proteins [BR:zro03400]
    ZYRO0A11176g
Transcription machinery [BR:zro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     ZYRO0A11176g
DNA repair and recombination proteins [BR:zro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     ZYRO0A11176g
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 VWA
Other DBs
NCBI-GeneID: 8202052
NCBI-ProteinID: XP_002494853
UniProt: C5DQF9
Position
A:complement(896333..897766)
AA seq 477 aa
MPPVIDPESDEDEEQVQVSSKETRRHKRELDQDEENDNDDDEGDVKSGSKSSSNPKDRNG
KASKDPKRNGRSARRNKTSNKALQGASGGYAWEDEIKRSWDLVPADDEGDMAALAASIVE
SRKKRTAQKNISPYQRGIIRTLILVLDCSEAMLEKDMRPNRHAMLVQYSIDFVHEFFDQN
PISQIGIVSMRNGLAHMISQVSGNPQDHVDALKSIRKQEPKGNPSLQNALEMTRGLLLPV
PPHCTKEVLIVFGSLSSTDPGDIHLTIGSLVQEGIRVKIIGLSAQVAICRELCKATNYGD
ESFYKVPLDEIHCKELFAEAVTPLPVNKINKGFTLVKMGFPTRIFEEAPTFCACHSKLLY
GGYFCPNCQSKVCSLPMVCPCCDLMLILSTHLARSYHHLMPLKTFSEVPTGQVFPTENCF
SCQVRFPTVKNHKTGELLTSSRYRCEDCLKDFCIDCDVFIHEILHNCPGCESKPTIT
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgccgccagtaatcgatcctgaatctgatgaagacgaggaacaagttcaagtttcctcc
aaggaaactagaagacacaagagggaattagaccaagacgaagagaatgataatgatgat
gatgaaggcgacgtaaaaagtggatctaaatcttcatcaaaccctaaagatcgtaatggg
aaagctagtaaagatccaaaacgtaatggtagaagtgcaagaaggaataagacgtctaat
aaggcattacaaggtgcaagcggtggttatgcatgggaagacgagattaagagaagttgg
gatttagtgccagctgatgatgaaggtgatatggcagcattagcggctagcatagtagag
tccagaaagaaaaggactgcacaaaaaaatattagtccgtatcaaagaggtattattaga
acgttaatacttgtattggattgtagtgaagcgatgttagaaaaggacatgagacctaat
aggcatgccatgttggtccagtactctattgatttcgttcatgaattttttgatcaaaat
cctatttcacagattggtatcgttagcatgcgtaatggcttggcacatatgattagtcaa
gttagtggtaacccacaggatcatgtagacgctttgaaatcaattaggaagcaggagcca
aaaggtaatccatctttacagaatgcattagaaatgacaagggggttgctgttgccggtg
ccgcctcattgtactaaggaagttcttatagtctttggttcactgtcgagtacagaccct
ggtgatattcatctaacgattggatcactagtgcaagaaggtatacgtgtaaagattatt
ggtctgtcggcacaggttgctatttgtcgagaattgtgtaaggcaaccaattatggtgat
gagtcgttttacaaagtgcctctggatgagattcattgtaaagaattatttgctgaggca
gtgacgccgcttccagttaataaaatcaataaaggtttcacgttggttaagatgggcttt
cctacgagaattttcgaagaagcgcccaccttttgtgcatgccattctaaactgttgtat
ggtggatatttttgtccaaactgccaaagtaaagtatgctcactgccgatggtttgtcct
tgttgtgatttaatgttaatattgtctacccatttagcgagatcctatcaccatctaatg
ccgttgaaaactttctcagaagtacctactggacaagtatttccaacggaaaattgtttc
agttgtcaagtgagattccctaccgttaaaaatcataaaaccggtgaacttctaaccagt
tctaggtatagatgtgaagactgtctcaaagatttttgcattgattgtgatgtctttatt
catgaaattttgcataattgccccggttgtgaatctaaaccaaccataacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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