KEGG   Zymoseptoria tritici: MYCGRDRAFT_42271
Entry
MYCGRDRAFT_42271  CDS       T02285                                 
Name
(RefSeq) hypothetical protein
  KO
K14284  nuclear RNA export factor
Organism
ztr  Zymoseptoria tritici
Pathway
ztr03008  Ribosome biogenesis in eukaryotes
ztr03013  Nucleocytoplasmic transport
ztr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ztr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MYCGRDRAFT_42271
   03015 mRNA surveillance pathway
    MYCGRDRAFT_42271
   03008 Ribosome biogenesis in eukaryotes
    MYCGRDRAFT_42271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ztr03019]
    MYCGRDRAFT_42271
   03009 Ribosome biogenesis [BR:ztr03009]
    MYCGRDRAFT_42271
Messenger RNA biogenesis [BR:ztr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     MYCGRDRAFT_42271
   mRNA cycle factors
    Stress granule specific factors
     MYCGRDRAFT_42271
Ribosome biogenesis [BR:ztr03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    MYCGRDRAFT_42271
SSDB
Motif
Pfam: TAP_C LRR_4 LRR_9 RRM_9
Other DBs
NCBI-GeneID: 13396968
NCBI-ProteinID: XP_003852646
JGI: Mycgr3_42271
UniProt: F9XC14
Position
5:complement(1201578..1203506)
AA seq 642 aa
MPGATRRGGGGAKRHARADRDGDVTMDAATKSRGRIGKAKASKDTPSRTPKNGVFGKNAQ
RNILRQAAAGDVNMKEGSKTLRTGPVELQITGWTKSKASDGNDRGVSALIKWLEKKASLR
LGSGRREVRINKSRVVEDDLFVTVPEQDATALKRMNGYGWAGATISIKRTGGNDDGPAVS
SQAEKTKAMLRGVLERRYNPDIKFLDLSALGQDEELKSQQIFDNKSTASKFFPAMMKVLS
MVFDTQAELNAAIESVSLANNELADLKSISSLSETLPKLHNLDLSHNKFENLASLDRWRK
RYLHLQHIVINNNPLEQNEPEYATSFLKWYPELRMINNVQVRTEEELAAASYLPFPIKSP
LFFDVDGIGEQFIRNWFLGFDTDRRALANMYYDHLSDFSYALNTAAPRDPSATVSLEKQE
WDYYIKNSRNLKKISQLPARVNREFHGPKDVGDLFDSLPKTKHADLGTEASKWIIEGHAQ
TGIPDTTTLTPGGVDGFRITLSGEYDELDDTTGQPTKKRSCDHSIVLGPGGPTGVRVVSH
HITIRAYGGTQAFKAPAASPPQAQPEAAQNNETLEPPILPSNLTLEVAEAMVFELTKRTN
MTLPMSKTCLEQTGWDFDTALAAFENVKGTLTAEAFNAVPVA
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcctggcgctacccgtcgcggcggtggtggtgccaagcgccacgctcgcgcagaccgc
gacggcgacgtcacaatggacgccgcaaccaaaagccgaggtagaatcggaaaagcgaaa
gcctcgaaggacacaccatctcgcactcccaagaacggagtcttcggcaagaatgcgcag
cgcaacatcttgcgccaagccgcagccggagatgtcaacatgaaggaaggaagcaaaacc
ttgcgcacaggcccggtcgagctccagatcaccggctggacaaaaagcaaggcttccgat
ggaaatgacagaggcgtcagcgctctgatcaaatggctggaaaagaaagccagtttaaga
ctaggctcgggacgcagagaagtgcgcatcaacaagtcacgtgtcgtggaagacgacctg
ttcgtcaccgtccccgagcaagacgctaccgcgctcaagcgcatgaacggatatggatgg
gcaggagcaaccatcagcatcaagcgaacaggaggaaacgacgatggtcccgcagtttcc
tcccaagcggaaaagacaaaagcgatgctccgaggcgtcctcgagcgccgctacaacccg
gatatcaaattcctggatctttccgcgttgggccaagacgaagaattgaagtcacagcaa
atcttcgacaacaaatcgacggccagcaaattcttcccggccatgatgaaggtcctcagc
atggtcttcgacacccaagccgagctcaacgccgcgatcgagagcgtctctctcgcaaat
aacgagcttgccgacctgaaatcgatctccagcttgtcggaaacactaccgaagctacac
aacctcgacctctcgcacaacaaattcgagaacctcgcctctcttgaccgatggcgcaaa
cggtatcttcatttgcagcacattgtcatcaacaacaatccgctcgaacagaacgagccg
gaatatgccacatcatttctcaagtggtatcccgaacttcggatgatcaacaacgtccaa
gtccgcaccgaggaagagcttgcagcagcgagttatcttcccttcccaatcaagtcgcca
ctcttctttgacgtagatggcatcggagagcaattcattcgaaactggtttctcggcttc
gacaccgaccgccgggctcttgccaacatgtactacgaccacctctcggacttctcatac
gcccttaacacagcggcgccacgagatccatcagcgacggtctcattggagaagcaagaa
tgggactactacatcaagaacagccggaatcttaagaagatttcgcagctgccagcacgt
gtgaaccgggagtttcatggacccaaagatgtcggcgatctgttcgactctcttccaaag
accaagcacgcagatcttggcacagaagccagcaagtggatcatcgagggacacgcgcag
actgggatcccagacaccaccacgttaacacccggcggcgtcgacggcttccgtattacc
ttgtcgggcgaatacgacgagctcgacgacacgactggccagccgactaagaagcgcagc
tgcgaccattccatcgtccttgggcctggtggacccactggagttcgcgtggtcagccac
cacatcacaatccgcgcatacggcggcacacaagcgttcaaagcgcctgccgcatcgcca
cctcaggcgcaacccgaagcggcccagaacaatgagactctggagccaccgatcctccca
tccaaccttaccttggaggtggccgaggcaatggttttcgaattgaccaagcgtacgaac
atgacgctgccaatgtcgaagacctgccttgagcagacgggatgggacttcgacacggca
ttggccgcgttcgagaatgtgaaaggaactctgacggcagaggcgttcaatgccgtgcct
gtcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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