KEGG   Zymoseptoria tritici: MYCGRDRAFT_55886
Entry
MYCGRDRAFT_55886  CDS       T02285                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ztr  Zymoseptoria tritici
Pathway
ztr03018  RNA degradation
ztr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ztr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCGRDRAFT_55886
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCGRDRAFT_55886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ztr03019]
    MYCGRDRAFT_55886
   03041 Spliceosome [BR:ztr03041]
    MYCGRDRAFT_55886
Messenger RNA biogenesis [BR:ztr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MYCGRDRAFT_55886
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MYCGRDRAFT_55886
Spliceosome [BR:ztr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MYCGRDRAFT_55886
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 13400723
NCBI-ProteinID: XP_003855145
JGI: Mycgr3_55886
UniProt: F9X381
Position
2:3054402..3055208
AA seq 83 aa
MDKDINVKFNGGREVTGTLKGYDQLMNLVLDNVKEMTRDEEGNTSSRSLGLLVVRGTLLV
LISPLDGSEEIANPFVVQDDDDE
NT seq 252 nt   +upstreamnt  +downstreamnt
atggacaaggacatcaatgtgaagttcaacggcggcagagaagtaacggggactttgaag
ggatatgatcagctcatgaatctggttctggacaatgtcaaggaaatgacaagagatgag
gagggcaacacaagttctcgctctcttggtctcctggtggtccgcggcacattactggta
ttgatctcgccactggatggaagcgaggagattgcgaatccattcgtggtccaggatgac
gacgacgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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