KEGG   Arvicola amphibius (Eurasian water vole): 119819107
Entry
119819107         CDS       T08327                                 
Symbol
Tubb4b
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04145  Phagocytosis
aamp04517  IgSF CAM signaling
aamp04540  Gap junction
aamp04814  Motor proteins
aamp05010  Alzheimer disease
aamp05012  Parkinson disease
aamp05014  Amyotrophic lateral sclerosis
aamp05016  Huntington disease
aamp05020  Prion disease
aamp05022  Pathways of neurodegeneration - multiple diseases
aamp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    119819107 (Tubb4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    119819107 (Tubb4b)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    119819107 (Tubb4b)
  09142 Cell motility
   04814 Motor proteins
    119819107 (Tubb4b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119819107 (Tubb4b)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    119819107 (Tubb4b)
   05012 Parkinson disease
    119819107 (Tubb4b)
   05014 Amyotrophic lateral sclerosis
    119819107 (Tubb4b)
   05016 Huntington disease
    119819107 (Tubb4b)
   05020 Prion disease
    119819107 (Tubb4b)
   05022 Pathways of neurodegeneration - multiple diseases
    119819107 (Tubb4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aamp03036]
    119819107 (Tubb4b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aamp04812]
    119819107 (Tubb4b)
   04147 Exosome [BR:aamp04147]
    119819107 (Tubb4b)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     119819107 (Tubb4b)
Cytoskeleton proteins [BR:aamp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    119819107 (Tubb4b)
Exosome [BR:aamp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119819107 (Tubb4b)
  Exosomal proteins of colorectal cancer cells
   119819107 (Tubb4b)
  Exosomal proteins of bladder cancer cells
   119819107 (Tubb4b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 119819107
NCBI-ProteinID: XP_038193062
Position
7:complement(42747661..42750000)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEVA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacctgcaggctgggcagtgcggcaaccagattggcgccaagttc
tgggaggtgatcagcgacgagcatggcattgatcccaccggcacgtaccacggagatagc
gacctccagctggagcgtatcaacgtgtactacaacgaggccaccggtggcaagtatgtg
ccccgcgccgtgctcgtggacttggagcccggcaccatggactccgtgcgctccgggccc
ttcgggcagatcttcagacctgataacttcgtcttcggtcagagtggggctgggaacaac
tgggccaaggggcactacacagaaggcgcagagctggttgactcggtgttggacgttgtg
aggaaggaagctgagagctgtgattgcctgcagggcttccagctgacccactccctgggc
ggggggactggttctgggatgggtaccctccttatcagcaagatccgggaggagtacccg
gacagaatcatgaacaccttcagtgtggtcccttcccccaaggtgtcggacacagtggtt
gagccttacaatgccaccctttcagttcaccagctcgttgaaaacacagatgagacctat
tgcattgataacgaagcactctatgacatctgtttcagaaccctaaagctgaccacaccc
acttatggtgacctgaaccatctagtgtccgccaccatgagtggggtaaccacttgcctg
cgattccctggccagctaaatgctgacctacggaagctggctgtaaatatggtgcccttc
cctcgcctgcacttcttcatgcctggctttgcccccttgaccagccggggcagccagcag
taccgggccctgaccgttcctgagctcactcagcagatgttcgatgccaagaacatgatg
gctgcctgtgatccccgccatgggcgctacttgacggtggctgccgtcttcaggggccgc
atgtctatgaaggaggtggacgaacagatgcttaacgtccagaacaagaacagcagctac
tttgttgagtggatccccaacaatgtgaaaacagctgtctgtgacattccacctcggggc
ctaaaaatgtccgccaccttcatcggcaacagcaccgccatccaggagctgttcaagcgc
atctcggagcagttcacagccatgttccggcgcaaggccttcctgcactggtacacaggc
gagggcatggatgagatggagttcaccgaggctgagagcaacatgaacgacctggtatct
gagtaccagcagtaccaggacgccacggctgaggaggagggcgagttcgaggaggaggct
gaggaggaggtggcctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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