KEGG   Anoxybacillus ayderensis: B379_15535
Entry
B379_15535        CDS       T10145                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
aayd  Anoxybacillus ayderensis
Pathway
aayd02024  Quorum sensing
aayd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aayd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B379_15535
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B379_15535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aayd03019]
    B379_15535
   03036 Chromosome and associated proteins [BR:aayd03036]
    B379_15535
Messenger RNA biogenesis [BR:aayd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     B379_15535
Chromosome and associated proteins [BR:aayd03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    B379_15535
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AXM90451
Position
complement(2905635..2905859)
AA seq 74 aa
MKNTINIQDQFLNQLRKEETTVTVFLLNGFQLRGLVKGFDNFTVLLEVDGRQQLIYKHAI
STFAPQKNVKIEME
NT seq 225 nt   +upstreamnt  +downstreamnt
atgaaaaacacaataaacattcaagatcagtttttaaaccaattgcgcaaggaagaaacg
acggttactgtctttttactcaatggatttcaattgcgtggtttagtaaaaggatttgac
aattttacggtgttattagaagtagatgggagacaacaattaatttataaacatgcgatt
tctacatttgcacctcaaaaaaatgtgaaaattgaaatggagtaa

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