KEGG   Acidithiobacillus sp. YTS05: MQE22_02340
Entry
MQE22_02340       CDS       T08616                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
aciy  Acidithiobacillus sp. YTS05
Brite
KEGG Orthology (KO) [BR:aciy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aciy03019]
    MQE22_02340 (rapZ)
Messenger RNA biogenesis [BR:aciy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     MQE22_02340 (rapZ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_18 AAA_33 AAA_28 AAA_22 AAA_17 DUF6643 AAA_29 AAA_16 AAA_21 ABC_tran AAA_23 APS_kinase nSTAND3 DUF4543 UBM CoaE AAA_SelU NACHT AAA_30 SMC_N cobW PRK nSTAND_NTPase5 T2SSE AAA_25 Aq_aa27
Other DBs
NCBI-ProteinID: UTV81477
Position
484311..485207
AA seq 298 aa
MSAAGDFVIITGLSGSGKTTVLQALEDLGYFCVDNLPATLLDSLLQELAHHQLAPLRVAV
SIDVRNRTFLDALPEALQKIPQECGLQPRILFLDADEETLLRRYSETRRRHPLSDQEAAP
GAALHQVLSRERTLLAPLARLADRVLDTSQVRSHSLRLRVQAWAQVARVQGLILLLQSFA
FRNGVPADSDFVFDLRALPNPHYEPELRSLTGRDGPVREFLDHQDAVQVARSSLEAFLQE
WLPPFARDHRNYVTISLGCTGGKHRSVYMVESLARSLARDGQEILVEHRELDIQERYS
NT seq 897 nt   +upstreamnt  +downstreamnt
gtgagcgccgctggtgattttgtcatcattacggggctgtccggttctggcaagacgacc
gtcttgcaggcactcgaagaccttggctatttttgtgtagacaatctgcccgctaccctc
ctggattccttgttgcaggaattggcgcaccaccaattggctcccctgcgggttgccgtg
agtatcgatgtgcgcaatcgcacctttctcgacgcattgccggaggcattacagaagata
ccgcaggaatgcggtctgcaaccgcgtatactctttctcgatgcggatgaagaaacgctg
ttacgccggtacagcgagacccggcgccgccaccccctcagcgatcaggaggcagcccca
ggagccgcgctgcatcaggtcttgtcgcgcgagcgcacccttctggctcccttggcgcgc
ctggccgatcgtgtgttggatacctcgcaggtccgcagccactctctgcgcctgcgtgtg
caggcctgggcgcaggtggcgcgggtccagggcctgatcttgctattgcagtctttcgct
tttcgcaacggggtacctgccgattccgattttgtcttcgacctgcgcgccttgcccaat
ccccattacgagcccgaactacggtctttgaccgggcgcgatggccctgtgcgggaattc
cttgaccatcaggatgccgtacaggtggccaggagcagtctggaggcctttctgcaggag
tggctacccccttttgctcgcgaccaccgaaactatgtcaccatttccctgggctgcacc
ggtggcaaacatcgtagcgtctacatggtcgaatccttggcgcgatccctggcgcgagat
gggcaggagatcttggtcgagcatcgcgagctcgatattcaggagcgctattcttga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (28)   
   Pfam (28)   
All databases (29)   

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