KEGG T11098: 108684493

Atta colombica: 108684493

Entry

108684493         CDS       T11098

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

acoc Atta colombica

Brite

KEGG Orthology (KO) [BR:acoc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acoc03041]
    108684493
Spliceosome [BR:acoc03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    108684493
Complex C
   U4/U6.U5 tri-SnRNP related factors
    108684493

SSDB

Motif

Pfam:

MA3 MIF4G SR-25 DUF2379

Other DBs

NCBI-GeneID:

108684493

NCBI-ProteinID:

XP_018044329

Position

Unknown

AA seq 734 aa
MKRSHSRRDEDENEERSRKRRDRKHDDSKELEHNGDPRNSRHYDDHRSSKRDSDHRSSRR
NDHRSHRYNEDREDLRDSDSEAGGKRNSPREEIGNRYYGEPDKARENPEDAKQKRTVDLL
TSRTGGAYIPPAKLRMLQAEITDKSGAAYQRIAWEALKKSIHGYINKVNTSNIGIITREL
LRENIIRGRGLLARSIIQAQAASPTFTPVYAALTSIINSKFPNIGELVLKRLVLQFKRGF
KRNDKPLCISSGTFIAHLVNQRVAYEIIALEILTLLLETPTDDSVEVAIAFLKECGMKLT
EVSRRGIEAIFEMLRNILHEGQLDKRVQYMIEVMFQIRKDGFKDHEAVLEELDLVEEEHQ
ITHLIRLDDEMEAQDILNVFKFDTDYLASEEKYKQLCKEILGSDVSDSEGNDEDGEEESS
DNDSSTEQTEGKEGVILDNTETNLTALRRTIYLTIHSSLDFEECAHKLMKMQLKPGQEIE
LCHMFLDCCAEMRTYEKFFGLLAGRFCAINKIYVTPFEQIFKDSYHTIHRLDTNKLRNVS
KFFAHLLFTDSISWSVLSCIKLNEEDTTSSNRIFIKILFQELSEYMGLAKLNERVKDVTL
QEVFEGLFPRDDPKNTRFAINFFTSIGLGGLTDDLREHLKSHPKPVAVPALITKEEEPSS
SDESSSSSSSSNPSSSTTISSTDSSSSSEDEVPAKKKKKKVLHKRKENKSKNKKEEKTKK
VPNKKKKGKTKKDK

NT seq 2205 nt +upstreamnt +downstreamnt
atgaagagatcgcattcacgaagggatgaggacgagaacgaggaacgttctcgtaagcgc
agagaccgcaaacatgatgactccaaagaattagagcataatggcgatcctaggaattcc
aggcactacgatgatcacaggagttccaagcgcgatagcgatcatcggagctcccgacgc
aacgatcacagaagtcatagatacaacgaggatcgtgaagatctcagggacagcgacagc
gaagcaggcggaaagcggaattcgccgcgggaagagattggcaacaggtattatggagaa
ccggataaagcgcgagagaatccagaggatgccaagcagaagcggacggtagatcttttg
acctcgaggacgggaggcgcgtacatcccacctgccaaattgcgtatgctccaagcagag
atcactgacaagtcaggagccgcttatcaacgtattgcctgggaagcgttaaagaaatct
attcacggatacatcaataaagtaaacaccagcaacatcgggatcataacgcgtgagctg
ctgcgcgagaacatcatccgaggtagaggtctgttagcacgatctattattcaagcacaa
gctgcgtctccaacattcactccagtttacgctgcattgacatctataatcaattctaag
tttcctaacataggcgagttggtgctgaagcggcttgttctgcaattcaaacgtggattc
aaaaggaatgataaacctttatgcatttcttcaggaacttttatagcgcatttggttaac
cagcgtgtggcttatgagattattgctttggaaatcttgactctactgctggagacgcca
accgatgattctgtcgaagtagccattgcatttttgaaggaatgtggtatgaaactgaca
gaggtttcgcgaaggggtatcgaggctatctttgaaatgctgagaaacatactgcatgag
ggacaattggataagcgagtccagtatatgatagaagttatgttccagatcaggaaggat
ggatttaaggatcatgaggctgtactcgaagaactagatctcgtggaggaagaacatcaa
atcactcatttgataagattggatgacgagatggaagcgcaagatatattaaacgtgttc
aagtttgacactgattatcttgcctccgaagagaagtacaagcaattgtgtaaagaaatt
cttggctcggatgtcagtgattcggaaggtaacgatgaagatggagaagaggaaagctcg
gacaacgacagcagcacagaacagaccgaaggaaaagaaggagtgatcctcgataataca
gaaacaaatctgaccgcacttcgacggactatatatctgactatacattcttcgctcgat
ttcgaggagtgtgcgcataaattgatgaaaatgcaactgaaacctgggcaggagatcgag
ctatgtcatatgtttttggactgttgcgcggaaatgcggacgtacgagaagttcttcggc
ctcctagccggtcggttttgcgccattaataaaatatatgtgacgccattcgagcagatt
ttcaaagactcttatcatacgatacaccgcctcgacacgaacaagttgcggaacgtatcg
aaattcttcgcgcatttactatttacagattccatatcgtggagcgtactttcgtgcata
aaattgaacgaggaagacactacgagttccaacagaatatttatcaaaatcttgtttcag
gagctctctgagtacatgggtctggcaaagctgaacgaacgggttaaagatgtaacgttg
caagaggtgtttgaaggactatttcccagagacgatccaaagaacacacgtttcgcgatc
aacttctttacgtcgatcggcttgggtggtttgacagatgatttgagagaacatttaaag
tcccatccgaagccagttgctgtgccggcattaattaccaaggaagaagaaccctcgagc
tctgacgagtctagcagttcgtcatccagttccaacccgtctagttcgacgacaatttct
tcgaccgattcttcttcatcatcagaggatgaagttccggcgaagaagaagaaaaagaaa
gtgttgcataaacgaaaagaaaataaatcgaaaaacaagaaggaagaaaagactaagaaa
gtgcccaacaagaagaagaaaggcaagacgaaaaaagacaaataa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

Download RDF

DBGET integrated database retrieval system