KEGG T10543: 138112911

Aphelocoma coerulescens (scrub jay): 138112911

Entry

138112911         CDS       T10543

Symbol

CWC22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

acoe Aphelocoma coerulescens (scrub jay)

Brite

KEGG Orthology (KO) [BR:acoe00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acoe03041]
    138112911 (CWC22)
Spliceosome [BR:acoe03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    138112911 (CWC22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    138112911 (CWC22)

SSDB

Motif

Pfam:

MA3 MIF4G HEAT_5MP1_2

Other DBs

NCBI-GeneID:

138112911

NCBI-ProteinID:

XP_068876604

Position

7:15781301..15813002

AA seq 904 aa
MKSRVTQVNHGSSHERKENYSSRHESLSPEDRDMERDRSRSPSPRKRRYSDDSRYDEEYS
RREYYDDRTSDGRRMERGRDRHERWEDREYDRRKQRRYSSPDRRSPERSTGQSSLAHDET
ASKKKKEEVDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVNKV
NVSNIENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAALVAIINSKFPNIGELI
LKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPTDDSIEVA
IGFIKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDGFKDHPII
PEGLDLVEEEDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKMLKKEILDEGDTES
EGNQEAGSSEEEEEDDEEEDEDGQKVTVHDKTEINLVSFRRTIYLAIQSSLDFEECAHKL
LKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYDTI
HRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGL
PNLNARLKDETLQPYFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKLIMT
QKQNVESSDSSSSSDTDSSSDSDSDSSSSSSESSSSSDSSSSSDSSSDSDVSKAKRRRTQ
KKNKESDKVSRKKQERRRKSLEKKMGRRHQEERSDTESKSERNHRHLRESHKRGDISKYH
HRDESNGRDGYHSGKDRNHERSKDPENKHSNSKLKKAERRASVSDDENYRHWSKDDEHRS
RKRERSKSRERDRGHCSPREEEQAERSRNGSEKHRDRHGRHPEQHRESRKNDDRRRESSP
HRRK

NT seq 2715 nt +upstreamnt +downstreamnt
atgaagagcagggtgacacaagtaaatcatggttccagtcacgaaaggaaggaaaactac
agttcccgacatgaaagtttgtctccagaggacagggatatggagcgtgataggtctcgg
tctccatctcccaggaagaggagatactctgatgacagcagatatgatgaggaatattca
agacgggaatactatgatgacagaacttcagatggaagaaggatggaaagggggagagac
agacatgagagatgggaggacagagaatatgatcgaaggaagcagagaagatactcatca
cctgaccgtaggagtccagagaggtcgacaggccagagctcacttgctcatgatgagact
gcctcgaagaagaagaaagaagaagtggatccaatcctcactcgcacaggtggtgcatat
attccacctgccaagctcaggatgatgcaagagcaaatcactgataaaaatagcttggca
tatcagaggatgagttgggaagccttgaagaagtcaatcaatggtcttgtcaataaagtg
aatgtttctaatatagaaaacatcattcatgagctccttcaggagaatattgttcgggga
aggggattgctgtctagatccattttgcaagctcagagtgcctctccgatttttactcat
gtttatgcagctcttgtggcaattatcaattcaaagtttccaaatattggtgaattgatc
ctcaagaggctgatactgaattttcgcaaaggatatcgcagaaatgacaagcaactctgt
ctaacatcttcaaaatttgttgcacatttgatgaatcagaatgtggctcatgaggtttta
tgtttggaaatgctcactttgcttcttgaaaggcctactgatgacagtattgaagtagca
attggatttattaaagagagtgggctcaaattaacagaagtttctcctagaggtattaat
gcaatctttgatcgccttcgacacattctgcatgaatctaaaatcgatatgcgtgttcag
tacatgatagaagtcatgtttgctgtacgaaaggatggcttcaaggatcatccaatcatt
ccagagggattagatctagtggaagaggaggatcagtttactcatatgttgccattggaa
gatgactacaacccagaggatgttcttaatgttttcaagatggatccaaactttatggaa
aatgaggagaaatacaaaatgctgaagaaagaaattcttgacgaaggtgacactgaatct
gaaggaaatcaagaagctggaagtagtgaggaagaggaagaagatgatgaagaggaggat
gaagatggtcagaaagttactgtccatgacaaaacagaaattaacctggtctctttccgt
cgtacaatttatcttgctattcagtcaagcttagactttgaagaatgtgctcacaaactg
ctgaagatggacttccctgaaagtcagactaaagaactctgcaatatgatacttgactgc
tgtgctcagcaaaggacatacgaaaaattctttgggttactggcagggcgcttctgcatg
ttaaagaaagaatatatggaatccttcgaagccattttcaaggaacagtacgataccatt
catcgtttggaaacgaacaaactgagaaacgtggccaagatgtttgctcatctcctgtac
accgattcaattccctggagtgtccttgaatgtataatactgagtgaagaaactaccaca
tcctccagtagaatttttgtcaaaatattctttcaggaactcagtgaatatatgggactt
cctaatttaaatgcaagattaaaagatgagacactgcagccttattttgagggattattg
cctcgggataacccaagaaacactcgctttgccatcaatttcttcacttctattggcctt
ggaggactaacggatgaattacgagaacatcttaaaaatgcaccaaagttgattatgaca
cagaagcaaaatgttgagtcatcagattcctcttcatcttcagacacagactcttcctca
gattctgattctgacagcagcagtagtagctcagagtcatccagcagcagtgactcctca
tctagcagtgacagcagcagtgactcagatgtttctaaagccaaaagaaggagaacacaa
aagaaaaataaagaatctgataaagtttccaggaaaaaacaagaaaggagaaggaaatcg
cttgaaaagaaaatgggaaggagacatcaagaggaaagaagtgatactgagagcaaatca
gaaagaaatcaccgacatttaagagagtcacacaagagaggtgacatatcaaaataccat
cacagagatgagtccaacggcagagatggttaccacagtgggaaggacaggaaccatgaa
agaagtaaggatccagaaaataaacacagtaattcaaaactgaagaaagcagaaagaaga
gcttctgtgtcagatgatgaaaattacagacactggagcaaagacgatgaacatcgtagt
aggaaaagagagagatcgaaatcccgggagagggaccgtggccattgcagtccgagggag
gaggagcaggcagagcgctccaggaacggttcggagaagcaccgggacaggcacggccgc
caccccgagcagcacagggagtcccggaagaacgacgacaggcgcagggagagttcccca
cacaggcggaaatga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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