KEGG   Aphelocoma coerulescens (scrub jay): 138121629
Entry
138121629         CDS       T10543                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138121629 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acoe03400]
    138121629 (POLB)
Enzymes [BR:acoe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     138121629 (POLB)
DNA repair and recombination proteins [BR:acoe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     138121629 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     138121629 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 HHH_3 NTP_transf_2 HHH_RS2-RL21-YNQ2 HHH_2 IMS_HHH_1 Cdd1 DUF6932
Other DBs
NCBI-GeneID: 138121629
NCBI-ProteinID: XP_068891436
UniProt: A0A7K7CDD1
Position
22:complement(5220223..5229469)
AA seq 335 aa
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISRYPSKIRSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINLLTRVTGIGPAAARKFVEEGIK
TLEDLRKIEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEIKKLDPNYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESSKQSKLLRHVVEQLEKVHFVTDMLSKGDTKFMGVCQ
LPDKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRR
LGVTGVAGEALPVECEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaagcgcaaagctccccaggagagccccaacgagggcatcaccgacttcctcacc
gaactggccaactacgagcgcaacgtgaaccgggccatccacaagtacaacgcgtacagg
aaagcggcctcggtcatttctcggtatccgagcaagatacggagcggggctgaagccaag
aagctggatggagtaggtgctaaaatagctgagaagatagacgagttcttatccactgga
aaattacgcaaattggaaaagattcgacaagatgatacaagtgcttctatcaacctcctg
acgcgagtcactggcattggtcctgctgctgctaggaagtttgtcgaggaaggaattaag
actctagaagatctaagaaaaattgaacacaagctgacccatcaccagcgaattgggttg
aagtattttgaagatttcgagaaaagaatcccaagggaagaaatgctgcaaatgcaggaa
attgtgctgaaggagataaagaagctggacccaaactatattgctacagtctgtggcagt
tttaggcgaggtgcagagtcaagcggcgatatggatgttctcctaacccatcccagcttc
acatctgaatcatccaaacagtcgaaacttctgcgtcatgttgtagaacaactagaaaaa
gtccactttgtcacagatatgctttctaaaggtgacacaaaattcatgggtgtctgtcag
ctgccagataaagaagatggaacagcctatccacataggagaatcgacatccggcttatc
ccaaaagatcagtattactgtggtgtactgtatttcacaggaagtgatatattcaataag
aacatgagaactcatgctctggaaatgggcttcacaatcaatgaatataccatacgtcgt
ttgggtgttactggagttgctggagaggccctgccagtagaatgtgaaaaagacatcttt
gactatatccagtggaagtaccgagagccaaaggatcggagtgaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (17)   

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